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DKFZ-ODCF / AlignmentAndQCWorkflows

The DKFZ alignment workflow plugin originally developed at the eilslabs
https://github.com/DKFZ-ODCF/AlignmentAndQCWorkflows/wiki
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Merge without duplication marking #52

Open vinjana opened 5 years ago

vinjana commented 5 years ago

Currently, merging of lanes is only possible together duplication marking.

Implement mere BAM merging, without marking in the WGS and WES workflows.