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DKMS / Hapl-o-Mat

A software for haplotype inference
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seek help in load parameters #18

Open simmimehra opened 1 month ago

simmimehra commented 1 month ago

I am encountering a problem while loading parameters in Hapl-o-mat GUI software. Whenever I am selecting the input file as named as ParameterMAC the software is telling please select a valid parameter file or set parameters via input mask, However the loci are visible in LOCI AND RESOLUTION column.

Please help. load parameters

usolloch commented 1 month ago

Good morning!

I have reproduced your problem with loading input data.

If you use the Hapl-o-Mat with the GUI for the first time, the paths specified in the default parameter file are not correct (as they are relative paths to the Hapl-o-Mat CLI folder). However, the GUI requires an absolute path for input.

Please try to load FILENAME_INPUT and FOLDER_RESULTS by using the two buttons to the right of the path fields and enter the path via the file explorer (see screenshot below) . After your first Hapl-o-Mat run, the default parameter file will be overwritten by the correct absolute file paths and can then be reloaded correctly using the load button.

I apologize for this inconvenience. We are working on a new release version of Hapl-o-Mat and the GUI and I will fix this issue in the upcoming release. Please let me know if this fixes your problem.

HaplomatGUI