Closed lindsayplatt closed 2 years ago
@lindsayplatt I set up the .sif file on tallgrass, and created the symlink with ln -s lake-temperature-model-prep_v0.1.sif lake-temperature-model-prep.sif
, so once you pull the changes down on tallgrass, you should be ready to submit to SLURM! We may need to iterate on the container, so please let me know if it runs into problems.
@jesse-ross thank you! Can't wait to try it out
Fixes #279 (but not #280). Ended up with tiles of 20x20 cells. With these updates, the full build took just over 15 hours (the download piece alone was 13, which was less than what it was for just MN locally).
Looking for @hcorson-dosch to review:
_targets.R
7_drivers_munge.yml
7_drivers_munge/out/7_GCM_driver_files.ind
build/status/N19kcml2ZXJzX211bmdlL291dC83X0dDTV9kcml2ZXJfZmlsZXMuaW5k.yml
Looking for @jesse-ross to review all the others (which he mostly has already):
README.md
.gitignore
docker/*
gcm_drivers.slrum
gcm_download.R
(though, I would really like this to just become a line in the slurm script, but I don't know how)launch-rstudio-container.slurm
-- Late additions below this line --
Forgot to include this quick little code snippet for how I determined the time required to run the sub-pipeline.