list object has no attribute values

[demolnau]

So I am trying to use bestsum as the taxrule and use the command below:

/home/demolnau/work/blobtoolkit/blobtools2/blobtools add \ --hits pegoscapus_spades_30X.ncbi.blastn.out \ --hits pegoscapus_scaffolds.diamond.blastx.out \ --hits pegoscapus_against_ceratosolen_solmsi.ncbi.blastn.out \ --hits pegoscapus_against_nasonia_vitripennis.ncbi.blastn.out \ --hits-cols 1=qseqid,2=sseqid,3=pident,4=length,5=mismatch,6=gapopen,7=qstart,8=qend,9=sstart,10=send,11=evalue,12=bitscore,13=staxids \ --taxrule bestsum \ --taxdump /home/demolnau/work/blobtoolkit/taxdump/ \ --replace \ /home/demolnau/work/pego_contaminants/datasets/pegoscapus_spades_assembly_30X/

and I keep getting this error

Loading parsed taxdump bestsum Traceback (most recent call last):   File "/home/demolnau/work/blobtoolkit/blobtools2/lib/add.py", line 165, in <module>     main()   File "/home/demolnau/work/blobtoolkit/blobtools2/lib/add.py", line 132, in main     meta=meta)   File "/work/LAS4/jnason-lab/demolnau/blobtoolkit/blobtools2/lib/hits.py", line 311, in parse     identifiers)   File "/work/LAS4/jnason-lab/demolnau/blobtoolkit/blobtools2/lib/hits.py", line 71, in apply_taxrule     blank = [None] * len(identifiers.values) AttributeError: 'list' object has no attribute 'values'

I thought this meant that the taxids were empty and I went back and altered the blast files so the taxids for the local hits gave an actual taxid numbers instead of N/A, but I am still getting this error so I am assuming I am missing a field somewhere.  When I search my files, there aren't any N/A columns. Am I missing an argument or is something in the wrong order?

[DRL]

Hi demolnau,

different blobtools, you want to ask here: https://github.com/blobtoolkit/blobtools2/issues

cheers,

dom