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DRL / blobtools

Modular command-line solution for visualisation, quality control and taxonomic partitioning of genome datasets
GNU General Public License v3.0
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CONCOCT #106

Closed sarah872 closed 3 years ago

sarah872 commented 3 years ago

Could you give some example code of how to use the coverage & taxonomy files from blobtools view --concoct with CONCOCT?

DRL commented 3 years ago

Hi sarah872,

i have never actually used it and was just asked to write an output function for a user.

I assume more information can be found here: https://concoct.readthedocs.io/en/latest/

But YMMV as it could also be that this format is no longer accepted by the latest version of CONCOCT.

cheers,

dom