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DReichLab / AdmixTools

Tools test whether admixture occurred and more
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Haploid setting? #50

Closed DinRigtigeFar closed 5 years ago

DinRigtigeFar commented 5 years ago

Hi Is it possible to run qpGraph with a haploid setting? I can see a reference to "haploid" in the qpGraph.c file (on line 1774). Is it as simple as to change the 0 to a 1?

Thanks in advance

bumblenick commented 5 years ago

1) Code inbreed: YES 2) Data should be pseudo-haploid -- 0 and 2 counts.

I will update the documentation shortly.

Nick

On Mon, Apr 29, 2019 at 9:51 AM DinRigtigeFar notifications@github.com wrote:

Hi Is it possible to run qpGraph with a haploid setting? I can see a reference to "haploid" in the qpGraph.c file (on line 1774). Is it as simple as to change the 0 to a 1?

Thanks in advance

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DinRigtigeFar commented 5 years ago

Thanks for the quick reply.