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DReichLab / AdmixTools

Tools test whether admixture occurred and more
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qpAdm - "pop: ??? has sample size 1 and inbreed set" error message #96

Open kimgeng5512 opened 2 years ago

kimgeng5512 commented 2 years ago

Hello, I have some problem with qpAdm problem, so I need your help. Please read this and answer me.

I got this error message after trying to running qpAdm this says that "pop: Fun23 has sample size 1 and inbreed set / Aborted (core dumped)" maybe this means that there is a problem that some groups has only one individual, but I think that we can run qpAdm although there are small amount of data.

qpAdm

This error message only comes when I set the parameter "allsnps: Yes" (if I set the parameter "allsnps: No", then the program runs smoothly with no problem)

What's the matter with my file? I need your help.

batelz commented 1 year ago

I'm facing the same issue. Was this resolved?

vicbp1 commented 1 year ago

Hi, I am running into the same issue. with allsnps: NO is running well, but I want to use the allsnps: Yes option. Any idea?