First off, thanks for building such a great program!
Didn't know where else to put this as I didn't see a centrifuge-user google group or anything so I thought i would share my experience here. Spent most of the morning building a Dockerfile for centrifuge and all my taxa kept getting assigned to the root. After many struggles I found the problem
/usr/bin/env: python: No such file or directory
It turns out that you need python2.7 for centrifuge-kreport to work properly. Maybe this will save someone else some time :)
First off, thanks for building such a great program!
Didn't know where else to put this as I didn't see a centrifuge-user google group or anything so I thought i would share my experience here. Spent most of the morning building a Dockerfile for centrifuge and all my taxa kept getting assigned to the root. After many struggles I found the problem
/usr/bin/env: python: No such file or directoryIt turns out that you need python2.7 for centrifuge-kreport to work properly. Maybe this will save someone else some time :)