DaehwanKimLab / hisat-genotype

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Please allow hisatgenotype to run with absolute paths #72

Open bozbezbozzel opened 1 year ago

bozbezbozzel commented 1 year ago

I'm aware of the --in-dir option, but not allowing absolute paths for input fastq's is making it way more difficult than it should be for me to incorporate hisatgenotype into my Snakemake workflow.