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DaehwanKimLab / hisat2

Graph-based alignment (Hierarchical Graph FM index)
GNU General Public License v3.0
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--new-summary option contains the SAM scores #153

Open MatteoSchiavinato opened 6 years ago

MatteoSchiavinato commented 6 years ago

I used the --new-summary option for the first time and I found all my sam scores in there. When using --summary instead, everything goes as planned.