hisat2:"--read-lengths" does not exist

DaehwanKimLab / hisat2

Graph-based alignment (Hierarchical Graph FM index)

GNU General Public License v3.0

464 stars 113 forks source link

Open ChengyueT opened 3 years ago

ChengyueT commented 3 years ago

1921611930881_ pic_hd I haven't had this problem with Hisat2 before. How can I solve this problem？ ThX!!!!!

parkchanhee commented 3 years ago

@TanChengyue1222

The index name and number of threads are missing in the command line (in hisat2.command) Please check the shell script