In hisat2, I am working in a python program, and plan to integrate hisat2, I am looking for a python API to call hisat2 to perform the "alignment" command. Hence, instead of using subprocess, is there an implementation of this?
or could you please recommend for the code part where should I look into it, so I can use some kind of python bindings function to allow me to call functions and pass data from Python to C.
Hi,
In hisat2, I am working in a python program, and plan to integrate hisat2, I am looking for a python API to call hisat2 to perform the "alignment" command. Hence, instead of using subprocess, is there an implementation of this? or could you please recommend for the code part where should I look into it, so I can use some kind of python bindings function to allow me to call functions and pass data from Python to C.
Best regards,