DaehwanKimLab / hisat2

Graph-based alignment (Hierarchical Graph FM index)
GNU General Public License v3.0
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Installing hisat2 with some problems #369

Open Huang-XN opened 2 years ago

Huang-XN commented 2 years ago

Hi there,

I was trying to install hisat2 on Ubuntu Linux. But there was a problem happening while compiling. The problem was as follow:

make: *** [Makefile:311: hisat2-align-s] Error 1

The command I used was make USE_SRA=1 NCBI_NGS_DIR=/usr/local/ngs/ngs-sdk NCBI_VDB_DIR=/usr/local/ncbi/ncbi-vdb

Thank you!