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DaehwanKimLab / hisat2

Graph-based alignment (Hierarchical Graph FM index)
GNU General Public License v3.0
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Bam output? #387

Open JunxiFeng opened 1 year ago

JunxiFeng commented 1 year ago

Hello,

I am wondering whether the result of mapping can be in bam format directly without using samtools for the conversion from sam format to bam. Is there such an option to do so?

Thanks!!