DaehwanKimLab / hisat2

Graph-based alignment (Hierarchical Graph FM index)
GNU General Public License v3.0
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mapped read length #400

Open wangjiawen2013 opened 1 year ago

wangjiawen2013 commented 1 year ago

Hi, What's the length ratio of a read mapped to reference will be considered as mapped ? For example, in the following cases, will the read be considered as mapped ? image and image