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Missing header line in some barcodes.tsv.gz and genes.tsv.gz files #142

Closed dsotirho-ucsc closed 4 years ago

dsotirho-ucsc commented 4 years ago

The following barcodes.tsv.gz files are missing a header line.

099c02da-23b2-5748-8618-92bc6770dc51/matrices/GSE106273_combined_matrix.tsv.gz/barcodes.tsv.gz
56483fc6-ab20-5495-bb93-8cd2ce8a322a/matrices/GSE124494_RAW__GSM3535280_HNLN1_matrix.mtx.gz/barcodes.tsv.gz
56483fc6-ab20-5495-bb93-8cd2ce8a322a/matrices/GSE124494_RAW__GSM3535279_AXLN4_matrix.mtx.gz/barcodes.tsv.gz
56483fc6-ab20-5495-bb93-8cd2ce8a322a/matrices/GSE124494_RAW__GSM3535277_AXLN2_matrix.mtx.gz/barcodes.tsv.gz
56483fc6-ab20-5495-bb93-8cd2ce8a322a/matrices/GSE124494_RAW__GSM3535278_AXLN3_matrix.mtx.gz/barcodes.tsv.gz
56483fc6-ab20-5495-bb93-8cd2ce8a322a/matrices/GSE124494_RAW__GSM3535281_HNLN2_matrix.mtx.gz/barcodes.tsv.gz
56483fc6-ab20-5495-bb93-8cd2ce8a322a/matrices/GSE124494_RAW__GSM3535276_AXLN1_matrix.mtx.gz/barcodes.tsv.gz
f10b6bef-febb-58dd-83ee-1180d076e53f/matrices/GSE108291_kid_matrix.mtx.gz/barcodes.tsv.gz
f10b6bef-febb-58dd-83ee-1180d076e53f/matrices/GSE108291_org4_matrix.mtx.gz/barcodes.tsv.gz
73fd591e-2310-5983-ba8a-8079c0d0b758/matrices/GSE130606_matrix.mtx.gz/barcodes.tsv.gz
b0f40b69-943f-5959-9457-c8e53c2d480e/matrices/GSE103275_RAW__GSM2759555_5wk-2-matrix.mtx.gz/barcodes.tsv.gz
b0f40b69-943f-5959-9457-c8e53c2d480e/matrices/GSE103275_RAW__GSM2510616_P4-matrix.mtx.gz/barcodes.tsv.gz
b0f40b69-943f-5959-9457-c8e53c2d480e/matrices/GSE103275_RAW__GSM2510617_P7-matrix.mtx.gz/barcodes.tsv.gz
b0f40b69-943f-5959-9457-c8e53c2d480e/matrices/GSE103275_RAW__GSM2759556_P7D-matrix.mtx.gz/barcodes.tsv.gz
b0f40b69-943f-5959-9457-c8e53c2d480e/matrices/GSE103275_RAW__GSM2759554_5wk-1-matrix.mtx.gz/barcodes.tsv.gz
b0f40b69-943f-5959-9457-c8e53c2d480e/matrices/GSE103275_RAW__GSM2759557_P7E-matrix.mtx.gz/barcodes.tsv.gz
389ad9f9-4a14-5a3d-b971-45dc3baf95f1/matrices/GSE124472_RAW__GSM3534657_H17w_Z2_raw_counts__matrix.mtx/barcodes.tsv.gz
389ad9f9-4a14-5a3d-b971-45dc3baf95f1/matrices/GSE124472_RAW__GSM3534659_H15w_Z2_raw_counts__matrix.mtx/barcodes.tsv.gz
389ad9f9-4a14-5a3d-b971-45dc3baf95f1/matrices/GSE124472_RAW__GSM3534658_H15w_Z1_raw_counts__matrix.mtx/barcodes.tsv.gz
389ad9f9-4a14-5a3d-b971-45dc3baf95f1/matrices/GSE124472_RAW__GSM3534661_HuOrg_D16_2_raw_counts__matrix.mtx/barcodes.tsv.gz
389ad9f9-4a14-5a3d-b971-45dc3baf95f1/matrices/GSE124472_RAW__GSM3534660_HuOrg_D16_1_raw_counts__matrix.mtx/barcodes.tsv.gz
389ad9f9-4a14-5a3d-b971-45dc3baf95f1/matrices/GSE124472_RAW__GSM3534663_HuOrg_D28_2_raw_counts__matrix.mtx/barcodes.tsv.gz
389ad9f9-4a14-5a3d-b971-45dc3baf95f1/matrices/GSE124472_RAW__GSM3534662_HuOrg_D28_1_raw_counts__matrix.mtx/barcodes.tsv.gz
389ad9f9-4a14-5a3d-b971-45dc3baf95f1/matrices/GSE124472_RAW__GSM3534656_H17w_Z1_raw_counts__matrix.mtx/barcodes.tsv.gz
36a7d62a-57ae-59af-ae8d-7dd2a8f1422e/matrices/GSE114802_org_matrix.mtx.gz/barcodes.tsv.gz
36a7d62a-57ae-59af-ae8d-7dd2a8f1422e/matrices/GSE114802_org4_matrix.mtx.gz/barcodes.tsv.gz
d9117a4f-36e0-5912-b8cd-744a0c5306c7/matrices/GSE131685_RAW__GSM4145204_kidney1_matrix.mtx.gz/barcodes.tsv.gz
d9117a4f-36e0-5912-b8cd-744a0c5306c7/matrices/GSE131685_RAW__GSM4145205_kidney2_matrix.mtx.gz/barcodes.tsv.gz
d9117a4f-36e0-5912-b8cd-744a0c5306c7/matrices/GSE131685_RAW__GSM4145206_kidney3_matrix.mtx.gz/barcodes.tsv.gz
2cdd0744-6422-57fd-8fdd-9ac2bb8bf257/matrices/GSE132044_cortex_mm10_count_matrix.mtx.gz/barcodes.tsv.gz
2cdd0744-6422-57fd-8fdd-9ac2bb8bf257/matrices/GSE132044_pbmc_hg38_count_matrix.mtx.gz/barcodes.tsv.gz
2cdd0744-6422-57fd-8fdd-9ac2bb8bf257/matrices/GSE132044_mixture_hg19_mm10_count_matrix.mtx.gz/barcodes.tsv.gz
0a8f2289-5862-5bf0-8c27-0885453de788/matrices/GSE130430_RAW__GSM3738537_25y_F_1_BM_matrix.mtx.gz/barcodes.tsv.gz
0a8f2289-5862-5bf0-8c27-0885453de788/matrices/GSE130430_RAW__GSM3738536_24y_F_BM_matrix.mtx.gz/barcodes.tsv.gz
0a8f2289-5862-5bf0-8c27-0885453de788/matrices/GSE130430_RAW__GSM3738543_26y_F_PB_matrix.mtx.gz/barcodes.tsv.gz
0a8f2289-5862-5bf0-8c27-0885453de788/matrices/GSE130430_RAW__GSM3738539_26y_F_BM_matrix.mtx.gz/barcodes.tsv.gz
0a8f2289-5862-5bf0-8c27-0885453de788/matrices/GSE130430_RAW__GSM3738542_25y_F_2_PB_matrix.mtx.gz/barcodes.tsv.gz
0a8f2289-5862-5bf0-8c27-0885453de788/matrices/GSE130430_RAW__GSM3738540_25y_M_BM_matrix.mtx.gz/barcodes.tsv.gz
0a8f2289-5862-5bf0-8c27-0885453de788/matrices/GSE130430_RAW__GSM3738538_25y_F_2_BM_matrix.mtx.gz/barcodes.tsv.gz
0a8f2289-5862-5bf0-8c27-0885453de788/matrices/GSE130430_RAW__GSM3738541_35y_M_BM_matrix.mtx.gz/barcodes.tsv.gz
11d48902-5824-5520-836b-7fc78ed02a61/matrices/GSE129798_Mouse_Adult_DGE_final__Mouse_Adult_DGE_final__matrix.mtx/barcodes.tsv.gz
88564eae-cceb-5eee-957d-5f0a251fb177/matrices/GSE96583_RAW__GSM2560246_B.mat.gz/barcodes.tsv.gz
88564eae-cceb-5eee-957d-5f0a251fb177/matrices/GSE96583_RAW__GSM2560247_C.mat.gz/barcodes.tsv.gz
88564eae-cceb-5eee-957d-5f0a251fb177/matrices/GSE96583_RAW__GSM2560248_2.1.mtx.gz/barcodes.tsv.gz
88564eae-cceb-5eee-957d-5f0a251fb177/matrices/GSE96583_RAW__GSM2560249_2.2.mtx.gz/barcodes.tsv.gz
88564eae-cceb-5eee-957d-5f0a251fb177/matrices/GSE96583_RAW__GSM2560245_A.mat.gz/barcodes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314341_Tp30_Rep3_Tom_matrix.mtx.gz/barcodes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314333_Tp0_Rep2_Tom_matrix.mtx.gz/barcodes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314336_Tp30_Rep1_GFP_matrix.mtx.gz/barcodes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314339_Tp30_Rep2_Tom_matrix.mtx.gz/barcodes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314351_M4_matrix.mtx.gz/barcodes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314346_Tp60_Rep3_GFP_matrix.mtx.gz/barcodes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314348_M1_matrix.mtx.gz/barcodes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314342_Tp60_Rep1_GFP_matrix.mtx.gz/barcodes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314350_M3_matrix.mtx.gz/barcodes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314352_M5_matrix.mtx.gz/barcodes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314343_Tp60_Rep1_Tom_matrix.mtx.gz/barcodes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314353_M6_matrix.mtx.gz/barcodes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314347_Tp60_Rep3_Tom_matrix.mtx.gz/barcodes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314344_Tp60_Rep2_GFP_matrix.mtx.gz/barcodes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314340_Tp30_Rep3_GFP_matrix.mtx.gz/barcodes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314332_Tp0_Rep2_GFP_matrix.mtx.gz/barcodes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314338_Tp30_Rep2_GFP_matrix.mtx.gz/barcodes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314331_Tp0_Rep1_Tom_matrix.mtx.gz/barcodes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314334_Tp0_Rep3_GFP_matrix.mtx.gz/barcodes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314345_Tp60_Rep2_Tom_matrix.mtx.gz/barcodes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314337_Tp30_Rep1_Tom_matrix.mtx.gz/barcodes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314349_M2_matrix.mtx.gz/barcodes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314330_Tp0_Rep1_GFP_matrix.mtx.gz/barcodes.tsv.gz

As well as their matching genes.tsv.gz file:

099c02da-23b2-5748-8618-92bc6770dc51/matrices/GSE106273_combined_matrix.tsv.gz/genes.tsv.gz
56483fc6-ab20-5495-bb93-8cd2ce8a322a/matrices/GSE124494_RAW__GSM3535280_HNLN1_matrix.mtx.gz/genes.tsv.gz
56483fc6-ab20-5495-bb93-8cd2ce8a322a/matrices/GSE124494_RAW__GSM3535279_AXLN4_matrix.mtx.gz/genes.tsv.gz
56483fc6-ab20-5495-bb93-8cd2ce8a322a/matrices/GSE124494_RAW__GSM3535277_AXLN2_matrix.mtx.gz/genes.tsv.gz
56483fc6-ab20-5495-bb93-8cd2ce8a322a/matrices/GSE124494_RAW__GSM3535278_AXLN3_matrix.mtx.gz/genes.tsv.gz
56483fc6-ab20-5495-bb93-8cd2ce8a322a/matrices/GSE124494_RAW__GSM3535281_HNLN2_matrix.mtx.gz/genes.tsv.gz
56483fc6-ab20-5495-bb93-8cd2ce8a322a/matrices/GSE124494_RAW__GSM3535276_AXLN1_matrix.mtx.gz/genes.tsv.gz
f10b6bef-febb-58dd-83ee-1180d076e53f/matrices/GSE108291_kid_matrix.mtx.gz/genes.tsv.gz
f10b6bef-febb-58dd-83ee-1180d076e53f/matrices/GSE108291_org4_matrix.mtx.gz/genes.tsv.gz
73fd591e-2310-5983-ba8a-8079c0d0b758/matrices/GSE130606_matrix.mtx.gz/genes.tsv.gz
b0f40b69-943f-5959-9457-c8e53c2d480e/matrices/GSE103275_RAW__GSM2759555_5wk-2-matrix.mtx.gz/genes.tsv.gz
b0f40b69-943f-5959-9457-c8e53c2d480e/matrices/GSE103275_RAW__GSM2510616_P4-matrix.mtx.gz/genes.tsv.gz
b0f40b69-943f-5959-9457-c8e53c2d480e/matrices/GSE103275_RAW__GSM2510617_P7-matrix.mtx.gz/genes.tsv.gz
b0f40b69-943f-5959-9457-c8e53c2d480e/matrices/GSE103275_RAW__GSM2759556_P7D-matrix.mtx.gz/genes.tsv.gz
b0f40b69-943f-5959-9457-c8e53c2d480e/matrices/GSE103275_RAW__GSM2759554_5wk-1-matrix.mtx.gz/genes.tsv.gz
b0f40b69-943f-5959-9457-c8e53c2d480e/matrices/GSE103275_RAW__GSM2759557_P7E-matrix.mtx.gz/genes.tsv.gz
389ad9f9-4a14-5a3d-b971-45dc3baf95f1/matrices/GSE124472_RAW__GSM3534657_H17w_Z2_raw_counts__matrix.mtx/genes.tsv.gz
389ad9f9-4a14-5a3d-b971-45dc3baf95f1/matrices/GSE124472_RAW__GSM3534659_H15w_Z2_raw_counts__matrix.mtx/genes.tsv.gz
389ad9f9-4a14-5a3d-b971-45dc3baf95f1/matrices/GSE124472_RAW__GSM3534658_H15w_Z1_raw_counts__matrix.mtx/genes.tsv.gz
389ad9f9-4a14-5a3d-b971-45dc3baf95f1/matrices/GSE124472_RAW__GSM3534661_HuOrg_D16_2_raw_counts__matrix.mtx/genes.tsv.gz
389ad9f9-4a14-5a3d-b971-45dc3baf95f1/matrices/GSE124472_RAW__GSM3534660_HuOrg_D16_1_raw_counts__matrix.mtx/genes.tsv.gz
389ad9f9-4a14-5a3d-b971-45dc3baf95f1/matrices/GSE124472_RAW__GSM3534663_HuOrg_D28_2_raw_counts__matrix.mtx/genes.tsv.gz
389ad9f9-4a14-5a3d-b971-45dc3baf95f1/matrices/GSE124472_RAW__GSM3534662_HuOrg_D28_1_raw_counts__matrix.mtx/genes.tsv.gz
389ad9f9-4a14-5a3d-b971-45dc3baf95f1/matrices/GSE124472_RAW__GSM3534656_H17w_Z1_raw_counts__matrix.mtx/genes.tsv.gz
36a7d62a-57ae-59af-ae8d-7dd2a8f1422e/matrices/GSE114802_org_matrix.mtx.gz/genes.tsv.gz
36a7d62a-57ae-59af-ae8d-7dd2a8f1422e/matrices/GSE114802_org4_matrix.mtx.gz/genes.tsv.gz
d9117a4f-36e0-5912-b8cd-744a0c5306c7/matrices/GSE131685_RAW__GSM4145204_kidney1_matrix.mtx.gz/genes.tsv.gz
d9117a4f-36e0-5912-b8cd-744a0c5306c7/matrices/GSE131685_RAW__GSM4145205_kidney2_matrix.mtx.gz/genes.tsv.gz
d9117a4f-36e0-5912-b8cd-744a0c5306c7/matrices/GSE131685_RAW__GSM4145206_kidney3_matrix.mtx.gz/genes.tsv.gz
2cdd0744-6422-57fd-8fdd-9ac2bb8bf257/matrices/GSE132044_cortex_mm10_count_matrix.mtx.gz/genes.tsv.gz
2cdd0744-6422-57fd-8fdd-9ac2bb8bf257/matrices/GSE132044_pbmc_hg38_count_matrix.mtx.gz/genes.tsv.gz
2cdd0744-6422-57fd-8fdd-9ac2bb8bf257/matrices/GSE132044_mixture_hg19_mm10_count_matrix.mtx.gz/genes.tsv.gz
0a8f2289-5862-5bf0-8c27-0885453de788/matrices/GSE130430_RAW__GSM3738537_25y_F_1_BM_matrix.mtx.gz/genes.tsv.gz
0a8f2289-5862-5bf0-8c27-0885453de788/matrices/GSE130430_RAW__GSM3738536_24y_F_BM_matrix.mtx.gz/genes.tsv.gz
0a8f2289-5862-5bf0-8c27-0885453de788/matrices/GSE130430_RAW__GSM3738543_26y_F_PB_matrix.mtx.gz/genes.tsv.gz
0a8f2289-5862-5bf0-8c27-0885453de788/matrices/GSE130430_RAW__GSM3738539_26y_F_BM_matrix.mtx.gz/genes.tsv.gz
0a8f2289-5862-5bf0-8c27-0885453de788/matrices/GSE130430_RAW__GSM3738542_25y_F_2_PB_matrix.mtx.gz/genes.tsv.gz
0a8f2289-5862-5bf0-8c27-0885453de788/matrices/GSE130430_RAW__GSM3738540_25y_M_BM_matrix.mtx.gz/genes.tsv.gz
0a8f2289-5862-5bf0-8c27-0885453de788/matrices/GSE130430_RAW__GSM3738538_25y_F_2_BM_matrix.mtx.gz/genes.tsv.gz
0a8f2289-5862-5bf0-8c27-0885453de788/matrices/GSE130430_RAW__GSM3738541_35y_M_BM_matrix.mtx.gz/genes.tsv.gz
11d48902-5824-5520-836b-7fc78ed02a61/matrices/GSE129798_Mouse_Adult_DGE_final__Mouse_Adult_DGE_final__matrix.mtx/genes.tsv.gz
88564eae-cceb-5eee-957d-5f0a251fb177/matrices/GSE96583_RAW__GSM2560246_B.mat.gz/genes.tsv.gz
88564eae-cceb-5eee-957d-5f0a251fb177/matrices/GSE96583_RAW__GSM2560247_C.mat.gz/genes.tsv.gz
88564eae-cceb-5eee-957d-5f0a251fb177/matrices/GSE96583_RAW__GSM2560248_2.1.mtx.gz/genes.tsv.gz
88564eae-cceb-5eee-957d-5f0a251fb177/matrices/GSE96583_RAW__GSM2560249_2.2.mtx.gz/genes.tsv.gz
88564eae-cceb-5eee-957d-5f0a251fb177/matrices/GSE96583_RAW__GSM2560245_A.mat.gz/genes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314341_Tp30_Rep3_Tom_matrix.mtx.gz/genes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314333_Tp0_Rep2_Tom_matrix.mtx.gz/genes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314336_Tp30_Rep1_GFP_matrix.mtx.gz/genes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314339_Tp30_Rep2_Tom_matrix.mtx.gz/genes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314351_M4_matrix.mtx.gz/genes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314346_Tp60_Rep3_GFP_matrix.mtx.gz/genes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314348_M1_matrix.mtx.gz/genes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314342_Tp60_Rep1_GFP_matrix.mtx.gz/genes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314350_M3_matrix.mtx.gz/genes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314352_M5_matrix.mtx.gz/genes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314343_Tp60_Rep1_Tom_matrix.mtx.gz/genes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314353_M6_matrix.mtx.gz/genes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314347_Tp60_Rep3_Tom_matrix.mtx.gz/genes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314344_Tp60_Rep2_GFP_matrix.mtx.gz/genes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314340_Tp30_Rep3_GFP_matrix.mtx.gz/genes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314332_Tp0_Rep2_GFP_matrix.mtx.gz/genes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314338_Tp30_Rep2_GFP_matrix.mtx.gz/genes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314331_Tp0_Rep1_Tom_matrix.mtx.gz/genes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314334_Tp0_Rep3_GFP_matrix.mtx.gz/genes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314345_Tp60_Rep2_Tom_matrix.mtx.gz/genes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314337_Tp30_Rep1_Tom_matrix.mtx.gz/genes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314349_M2_matrix.mtx.gz/genes.tsv.gz
9fc2d285-804a-5989-956f-1843a0f11673/matrices/GSE103354_RAW__GSM3314330_Tp0_Rep1_GFP_matrix.mtx.gz/genes.tsv.gz

A useful terminal command to see the first few lines of all the barcodes.tsv.gz files is:

find projects/ -name barcodes.tsv.gz | while read -r file; do echo "$file"; zcat -f "$file" | head -n 5; done
hannes-ucsc commented 4 years ago

I have code to fix these cases in a different branch (https://github.com/DailyDreaming/load-project/pull/140).

hannes-ucsc commented 4 years ago

140 has been merged into #147 but #147 hasn't been merged yet and needs more work.

hannes-ucsc commented 4 years ago

Exhaustive listing of discrepancies from the new and improved count_cells.py:

python3 count_cells.py --list --fast --medium 2>&1 | grep WARNING
WARNING:root:Cell count mismatch in projects/GSE131685/matrices/GSE131685_RAW__GSM4145204_kidney1_matrix.mtx.gz: {'medium': 8163, 'fast': 8164}
WARNING:root:Gene count mismatch in projects/GSE131685/matrices/GSE131685_RAW__GSM4145204_kidney1_matrix.mtx.gz: {'medium': 33537, 'fast': 33538}
WARNING:root:Cell count mismatch in projects/GSE131685/matrices/GSE131685_RAW__GSM4145205_kidney2_matrix.mtx.gz: {'medium': 6498, 'fast': 6499}
WARNING:root:Gene count mismatch in projects/GSE131685/matrices/GSE131685_RAW__GSM4145205_kidney2_matrix.mtx.gz: {'medium': 33537, 'fast': 33538}
WARNING:root:Cell count mismatch in projects/GSE131685/matrices/GSE131685_RAW__GSM4145206_kidney3_matrix.mtx.gz: {'medium': 10740, 'fast': 10741}
WARNING:root:Gene count mismatch in projects/GSE131685/matrices/GSE131685_RAW__GSM4145206_kidney3_matrix.mtx.gz: {'medium': 33537, 'fast': 33538}
WARNING:root:Cell count mismatch in projects/GSE131685: {'medium': 25401, 'fast': 25404}
WARNING:root:Gene count mismatch in projects/GSE131685: {'medium': 100611, 'fast': 100614}
WARNING:root:Cell count mismatch in projects/GSE114802/matrices/GSE114802_org_matrix.mtx.gz: {'medium': 7003, 'fast': 7004}
WARNING:root:Gene count mismatch in projects/GSE114802/matrices/GSE114802_org_matrix.mtx.gz: {'medium': 33693, 'fast': 33694}
WARNING:root:Cell count mismatch in projects/GSE114802/matrices/GSE114802_org4_matrix.mtx.gz: {'medium': 1420, 'fast': 1421}
WARNING:root:Gene count mismatch in projects/GSE114802/matrices/GSE114802_org4_matrix.mtx.gz: {'medium': 33693, 'fast': 33694}
WARNING:root:Cell count mismatch in projects/GSE114802: {'medium': 8423, 'fast': 8425}
WARNING:root:Gene count mismatch in projects/GSE114802: {'medium': 67386, 'fast': 67388}
WARNING:root:Cell count mismatch in projects/GSE132044/matrices/GSE132044_cortex_mm10_count_matrix.mtx.gz: {'medium': 15174, 'fast': 15175}
WARNING:root:Gene count mismatch in projects/GSE132044/matrices/GSE132044_cortex_mm10_count_matrix.mtx.gz: {'medium': 28691, 'fast': 28692}
WARNING:root:Cell count mismatch in projects/GSE132044/matrices/GSE132044_pbmc_hg38_count_matrix.mtx.gz: {'medium': 44614, 'fast': 44615}
WARNING:root:Gene count mismatch in projects/GSE132044/matrices/GSE132044_pbmc_hg38_count_matrix.mtx.gz: {'medium': 33693, 'fast': 33694}
WARNING:root:Cell count mismatch in projects/GSE132044/matrices/GSE132044_mixture_hg19_mm10_count_matrix.mtx.gz: {'medium': 27713, 'fast': 27714}
WARNING:root:Gene count mismatch in projects/GSE132044/matrices/GSE132044_mixture_hg19_mm10_count_matrix.mtx.gz: {'medium': 62045, 'fast': 62046}
WARNING:root:Cell count mismatch in projects/GSE132044: {'medium': 87501, 'fast': 87504}
WARNING:root:Gene count mismatch in projects/GSE132044: {'medium': 124429, 'fast': 124432}
WARNING:root:Cell count mismatch in projects/GSE124472/matrices/GSE124472_RAW__GSM3534657_H17w_Z2_raw_counts__matrix.mtx: {'medium': 4218, 'fast': 4219}
WARNING:root:Gene count mismatch in projects/GSE124472/matrices/GSE124472_RAW__GSM3534657_H17w_Z2_raw_counts__matrix.mtx: {'medium': 63567, 'fast': 63568}
WARNING:root:Cell count mismatch in projects/GSE124472/matrices/GSE124472_RAW__GSM3534659_H15w_Z2_raw_counts__matrix.mtx: {'medium': 3000, 'fast': 3001}
WARNING:root:Gene count mismatch in projects/GSE124472/matrices/GSE124472_RAW__GSM3534659_H15w_Z2_raw_counts__matrix.mtx: {'medium': 32737, 'fast': 32738}
WARNING:root:Cell count mismatch in projects/GSE124472/matrices/GSE124472_RAW__GSM3534658_H15w_Z1_raw_counts__matrix.mtx: {'medium': 3195, 'fast': 3196}
WARNING:root:Gene count mismatch in projects/GSE124472/matrices/GSE124472_RAW__GSM3534658_H15w_Z1_raw_counts__matrix.mtx: {'medium': 32737, 'fast': 32738}
WARNING:root:Cell count mismatch in projects/GSE124472/matrices/GSE124472_RAW__GSM3534661_HuOrg_D16_2_raw_counts__matrix.mtx: {'medium': 1661, 'fast': 1662}
WARNING:root:Gene count mismatch in projects/GSE124472/matrices/GSE124472_RAW__GSM3534661_HuOrg_D16_2_raw_counts__matrix.mtx: {'medium': 32737, 'fast': 32738}
WARNING:root:Cell count mismatch in projects/GSE124472/matrices/GSE124472_RAW__GSM3534660_HuOrg_D16_1_raw_counts__matrix.mtx: {'medium': 490, 'fast': 491}
WARNING:root:Gene count mismatch in projects/GSE124472/matrices/GSE124472_RAW__GSM3534660_HuOrg_D16_1_raw_counts__matrix.mtx: {'medium': 32737, 'fast': 32738}
WARNING:root:Cell count mismatch in projects/GSE124472/matrices/GSE124472_RAW__GSM3534663_HuOrg_D28_2_raw_counts__matrix.mtx: {'medium': 2667, 'fast': 2668}
WARNING:root:Gene count mismatch in projects/GSE124472/matrices/GSE124472_RAW__GSM3534663_HuOrg_D28_2_raw_counts__matrix.mtx: {'medium': 32737, 'fast': 32738}
WARNING:root:Cell count mismatch in projects/GSE124472/matrices/GSE124472_RAW__GSM3534662_HuOrg_D28_1_raw_counts__matrix.mtx: {'medium': 3149, 'fast': 3150}
WARNING:root:Gene count mismatch in projects/GSE124472/matrices/GSE124472_RAW__GSM3534662_HuOrg_D28_1_raw_counts__matrix.mtx: {'medium': 32737, 'fast': 32738}
WARNING:root:Cell count mismatch in projects/GSE124472/matrices/GSE124472_RAW__GSM3534656_H17w_Z1_raw_counts__matrix.mtx: {'medium': 4299, 'fast': 4300}
WARNING:root:Gene count mismatch in projects/GSE124472/matrices/GSE124472_RAW__GSM3534656_H17w_Z1_raw_counts__matrix.mtx: {'medium': 63567, 'fast': 63568}
WARNING:root:Cell count mismatch in projects/GSE124472: {'medium': 22679, 'fast': 22687}
WARNING:root:Gene count mismatch in projects/GSE124472: {'medium': 323556, 'fast': 323564}
WARNING:root:Cell count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314341_Tp30_Rep3_Tom_matrix.mtx.gz: {'medium': 3568, 'fast': 3569}
WARNING:root:Gene count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314341_Tp30_Rep3_Tom_matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314333_Tp0_Rep2_Tom_matrix.mtx.gz: {'medium': 3261, 'fast': 3262}
WARNING:root:Gene count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314333_Tp0_Rep2_Tom_matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314336_Tp30_Rep1_GFP_matrix.mtx.gz: {'medium': 4049, 'fast': 4050}
WARNING:root:Gene count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314336_Tp30_Rep1_GFP_matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314339_Tp30_Rep2_Tom_matrix.mtx.gz: {'medium': 4023, 'fast': 4024}
WARNING:root:Gene count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314339_Tp30_Rep2_Tom_matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314351_M4_matrix.mtx.gz: {'medium': 2596, 'fast': 2597}
WARNING:root:Gene count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314351_M4_matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314346_Tp60_Rep3_GFP_matrix.mtx.gz: {'medium': 5690, 'fast': 5691}
WARNING:root:Gene count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314346_Tp60_Rep3_GFP_matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314348_M1_matrix.mtx.gz: {'medium': 1290, 'fast': 1291}
WARNING:root:Gene count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314348_M1_matrix.mtx.gz: {'medium': 27774, 'fast': 27775}
WARNING:root:Cell count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314342_Tp60_Rep1_GFP_matrix.mtx.gz: {'medium': 5323, 'fast': 5324}
WARNING:root:Gene count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314342_Tp60_Rep1_GFP_matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314350_M3_matrix.mtx.gz: {'medium': 2424, 'fast': 2425}
WARNING:root:Gene count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314350_M3_matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314352_M5_matrix.mtx.gz: {'medium': 426, 'fast': 427}
WARNING:root:Gene count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314352_M5_matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314343_Tp60_Rep1_Tom_matrix.mtx.gz: {'medium': 4456, 'fast': 4457}
WARNING:root:Gene count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314343_Tp60_Rep1_Tom_matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314353_M6_matrix.mtx.gz: {'medium': 702, 'fast': 703}
WARNING:root:Gene count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314353_M6_matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314347_Tp60_Rep3_Tom_matrix.mtx.gz: {'medium': 3878, 'fast': 3879}
WARNING:root:Gene count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314347_Tp60_Rep3_Tom_matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314344_Tp60_Rep2_GFP_matrix.mtx.gz: {'medium': 4811, 'fast': 4812}
WARNING:root:Gene count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314344_Tp60_Rep2_GFP_matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314340_Tp30_Rep3_GFP_matrix.mtx.gz: {'medium': 5067, 'fast': 5068}
WARNING:root:Gene count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314340_Tp30_Rep3_GFP_matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314332_Tp0_Rep2_GFP_matrix.mtx.gz: {'medium': 2048, 'fast': 2049}
WARNING:root:Gene count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314332_Tp0_Rep2_GFP_matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314338_Tp30_Rep2_GFP_matrix.mtx.gz: {'medium': 3815, 'fast': 3816}
WARNING:root:Gene count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314338_Tp30_Rep2_GFP_matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314331_Tp0_Rep1_Tom_matrix.mtx.gz: {'medium': 2956, 'fast': 2957}
WARNING:root:Gene count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314331_Tp0_Rep1_Tom_matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314334_Tp0_Rep3_GFP_matrix.mtx.gz: {'medium': 3505, 'fast': 3506}
WARNING:root:Gene count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314334_Tp0_Rep3_GFP_matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314345_Tp60_Rep2_Tom_matrix.mtx.gz: {'medium': 2941, 'fast': 2942}
WARNING:root:Gene count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314345_Tp60_Rep2_Tom_matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314337_Tp30_Rep1_Tom_matrix.mtx.gz: {'medium': 3785, 'fast': 3786}
WARNING:root:Gene count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314337_Tp30_Rep1_Tom_matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314349_M2_matrix.mtx.gz: {'medium': 266, 'fast': 267}
WARNING:root:Gene count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314349_M2_matrix.mtx.gz: {'medium': 27774, 'fast': 27775}
WARNING:root:Cell count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314335_Tp0_Rep3_Tom_matrix.mtx.gz: {'medium': 3052, 'fast': 3053}
WARNING:root:Gene count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314335_Tp0_Rep3_Tom_matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314330_Tp0_Rep1_GFP_matrix.mtx.gz: {'medium': 5134, 'fast': 5135}
WARNING:root:Gene count mismatch in projects/GSE103354/matrices/GSE103354_RAW__GSM3314330_Tp0_Rep1_GFP_matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103354: {'medium': 79066, 'fast': 79090}
WARNING:root:Gene count mismatch in projects/GSE103354: {'medium': 671482, 'fast': 671506}
WARNING:root:Cell count mismatch in projects/GSE103275/matrices/GSE103275_RAW__GSM2759555_5wk-2-matrix.mtx.gz: {'medium': 5399, 'fast': 5400}
WARNING:root:Gene count mismatch in projects/GSE103275/matrices/GSE103275_RAW__GSM2759555_5wk-2-matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103275/matrices/GSE103275_RAW__GSM2510616_P4-matrix.mtx.gz: {'medium': 4770, 'fast': 4771}
WARNING:root:Gene count mismatch in projects/GSE103275/matrices/GSE103275_RAW__GSM2510616_P4-matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103275/matrices/GSE103275_RAW__GSM2510617_P7-matrix.mtx.gz: {'medium': 3301, 'fast': 3302}
WARNING:root:Gene count mismatch in projects/GSE103275/matrices/GSE103275_RAW__GSM2510617_P7-matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103275/matrices/GSE103275_RAW__GSM2759556_P7D-matrix.mtx.gz: {'medium': 2438, 'fast': 2439}
WARNING:root:Gene count mismatch in projects/GSE103275/matrices/GSE103275_RAW__GSM2759556_P7D-matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103275/matrices/GSE103275_RAW__GSM2759554_5wk-1-matrix.mtx.gz: {'medium': 5427, 'fast': 5428}
WARNING:root:Gene count mismatch in projects/GSE103275/matrices/GSE103275_RAW__GSM2759554_5wk-1-matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103275/matrices/GSE103275_RAW__GSM2759557_P7E-matrix.mtx.gz: {'medium': 2728, 'fast': 2729}
WARNING:root:Gene count mismatch in projects/GSE103275/matrices/GSE103275_RAW__GSM2759557_P7E-matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE103275: {'medium': 24063, 'fast': 24069}
WARNING:root:Gene count mismatch in projects/GSE103275: {'medium': 167982, 'fast': 167988}
WARNING:root:Cell count mismatch in projects/GSE130606/matrices/GSE130606_matrix.mtx.gz: {'medium': 7923, 'fast': 7924}
WARNING:root:Gene count mismatch in projects/GSE130606/matrices/GSE130606_matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE130606: {'medium': 7923, 'fast': 7924}
WARNING:root:Gene count mismatch in projects/GSE130606: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE96583/matrices/GSE96583_RAW__GSM2560246_B.mat.gz: {'medium': 4245, 'fast': 4246}
WARNING:root:Gene count mismatch in projects/GSE96583/matrices/GSE96583_RAW__GSM2560246_B.mat.gz: {'medium': 32737, 'fast': 32738}
WARNING:root:Cell count mismatch in projects/GSE96583/matrices/GSE96583_RAW__GSM2560247_C.mat.gz: {'medium': 6144, 'fast': 6145}
WARNING:root:Gene count mismatch in projects/GSE96583/matrices/GSE96583_RAW__GSM2560247_C.mat.gz: {'medium': 32737, 'fast': 32738}
WARNING:root:Cell count mismatch in projects/GSE96583/matrices/GSE96583_RAW__GSM2560248_2.1.mtx.gz: {'medium': 14618, 'fast': 14619}
WARNING:root:Gene count mismatch in projects/GSE96583/matrices/GSE96583_RAW__GSM2560248_2.1.mtx.gz: {'medium': 35634, 'fast': 35635}
WARNING:root:Cell count mismatch in projects/GSE96583/matrices/GSE96583_RAW__GSM2560249_2.2.mtx.gz: {'medium': 14445, 'fast': 14446}
WARNING:root:Gene count mismatch in projects/GSE96583/matrices/GSE96583_RAW__GSM2560249_2.2.mtx.gz: {'medium': 35634, 'fast': 35635}
WARNING:root:Cell count mismatch in projects/GSE96583/matrices/GSE96583_RAW__GSM2560245_A.mat.gz: {'medium': 3638, 'fast': 3639}
WARNING:root:Gene count mismatch in projects/GSE96583/matrices/GSE96583_RAW__GSM2560245_A.mat.gz: {'medium': 32737, 'fast': 32738}
WARNING:root:Cell count mismatch in projects/GSE96583: {'medium': 43090, 'fast': 43095}
WARNING:root:Gene count mismatch in projects/GSE96583: {'medium': 169479, 'fast': 169484}
WARNING:root:Cell count mismatch in projects/GSE130430/matrices/GSE130430_RAW__GSM3738537_25y_F_1_BM_matrix.mtx.gz: {'medium': 894, 'fast': 895}
WARNING:root:Gene count mismatch in projects/GSE130430/matrices/GSE130430_RAW__GSM3738537_25y_F_1_BM_matrix.mtx.gz: {'medium': 32737, 'fast': 32738}
WARNING:root:Cell count mismatch in projects/GSE130430/matrices/GSE130430_RAW__GSM3738536_24y_F_BM_matrix.mtx.gz: {'medium': 885, 'fast': 886}
WARNING:root:Gene count mismatch in projects/GSE130430/matrices/GSE130430_RAW__GSM3738536_24y_F_BM_matrix.mtx.gz: {'medium': 32737, 'fast': 32738}
WARNING:root:Cell count mismatch in projects/GSE130430/matrices/GSE130430_RAW__GSM3738543_26y_F_PB_matrix.mtx.gz: {'medium': 1529, 'fast': 1530}
WARNING:root:Gene count mismatch in projects/GSE130430/matrices/GSE130430_RAW__GSM3738543_26y_F_PB_matrix.mtx.gz: {'medium': 32737, 'fast': 32738}
WARNING:root:Cell count mismatch in projects/GSE130430/matrices/GSE130430_RAW__GSM3738539_26y_F_BM_matrix.mtx.gz: {'medium': 1344, 'fast': 1345}
WARNING:root:Gene count mismatch in projects/GSE130430/matrices/GSE130430_RAW__GSM3738539_26y_F_BM_matrix.mtx.gz: {'medium': 32737, 'fast': 32738}
WARNING:root:Cell count mismatch in projects/GSE130430/matrices/GSE130430_RAW__GSM3738542_25y_F_2_PB_matrix.mtx.gz: {'medium': 1633, 'fast': 1634}
WARNING:root:Gene count mismatch in projects/GSE130430/matrices/GSE130430_RAW__GSM3738542_25y_F_2_PB_matrix.mtx.gz: {'medium': 32737, 'fast': 32738}
WARNING:root:Cell count mismatch in projects/GSE130430/matrices/GSE130430_RAW__GSM3738540_25y_M_BM_matrix.mtx.gz: {'medium': 940, 'fast': 941}
WARNING:root:Gene count mismatch in projects/GSE130430/matrices/GSE130430_RAW__GSM3738540_25y_M_BM_matrix.mtx.gz: {'medium': 32737, 'fast': 32738}
WARNING:root:Cell count mismatch in projects/GSE130430/matrices/GSE130430_RAW__GSM3738538_25y_F_2_BM_matrix.mtx.gz: {'medium': 1280, 'fast': 1281}
WARNING:root:Gene count mismatch in projects/GSE130430/matrices/GSE130430_RAW__GSM3738538_25y_F_2_BM_matrix.mtx.gz: {'medium': 32737, 'fast': 32738}
WARNING:root:Cell count mismatch in projects/GSE130430/matrices/GSE130430_RAW__GSM3738541_35y_M_BM_matrix.mtx.gz: {'medium': 803, 'fast': 804}
WARNING:root:Gene count mismatch in projects/GSE130430/matrices/GSE130430_RAW__GSM3738541_35y_M_BM_matrix.mtx.gz: {'medium': 32737, 'fast': 32738}
WARNING:root:Cell count mismatch in projects/GSE130430: {'medium': 9308, 'fast': 9316}
WARNING:root:Gene count mismatch in projects/GSE130430: {'medium': 261896, 'fast': 261904}
WARNING:root:Cell count mismatch in projects/GSE129798/matrices/GSE129798_Mouse_Adult_DGE_final__Mouse_Adult_DGE_final__matrix.mtx: {'medium': 31264, 'fast': 31265}
WARNING:root:Gene count mismatch in projects/GSE129798/matrices/GSE129798_Mouse_Adult_DGE_final__Mouse_Adult_DGE_final__matrix.mtx: {'medium': 19124, 'fast': 19125}
WARNING:root:Cell count mismatch in projects/GSE129798: {'medium': 31264, 'fast': 31265}
WARNING:root:Gene count mismatch in projects/GSE129798: {'medium': 19124, 'fast': 19125}
WARNING:root:Cell count mismatch in projects/GSE106273/matrices/GSE106273_combined_matrix.tsv.gz: {'medium': 25805, 'fast': 25806}
WARNING:root:Gene count mismatch in projects/GSE106273/matrices/GSE106273_combined_matrix.tsv.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE106273: {'medium': 25805, 'fast': 25806}
WARNING:root:Gene count mismatch in projects/GSE106273: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE124494/matrices/GSE124494_RAW__GSM3535280_HNLN1_matrix.mtx.gz: {'medium': 5275, 'fast': 5276}
WARNING:root:Gene count mismatch in projects/GSE124494/matrices/GSE124494_RAW__GSM3535280_HNLN1_matrix.mtx.gz: {'medium': 32737, 'fast': 32738}
WARNING:root:Cell count mismatch in projects/GSE124494/matrices/GSE124494_RAW__GSM3535279_AXLN4_matrix.mtx.gz: {'medium': 4615, 'fast': 4616}
WARNING:root:Gene count mismatch in projects/GSE124494/matrices/GSE124494_RAW__GSM3535279_AXLN4_matrix.mtx.gz: {'medium': 32737, 'fast': 32738}
WARNING:root:Cell count mismatch in projects/GSE124494/matrices/GSE124494_RAW__GSM3535277_AXLN2_matrix.mtx.gz: {'medium': 3935, 'fast': 3936}
WARNING:root:Gene count mismatch in projects/GSE124494/matrices/GSE124494_RAW__GSM3535277_AXLN2_matrix.mtx.gz: {'medium': 32737, 'fast': 32738}
WARNING:root:Cell count mismatch in projects/GSE124494/matrices/GSE124494_RAW__GSM3535278_AXLN3_matrix.mtx.gz: {'medium': 7214, 'fast': 7215}
WARNING:root:Gene count mismatch in projects/GSE124494/matrices/GSE124494_RAW__GSM3535278_AXLN3_matrix.mtx.gz: {'medium': 32737, 'fast': 32738}
WARNING:root:Cell count mismatch in projects/GSE124494/matrices/GSE124494_RAW__GSM3535281_HNLN2_matrix.mtx.gz: {'medium': 3562, 'fast': 3563}
WARNING:root:Gene count mismatch in projects/GSE124494/matrices/GSE124494_RAW__GSM3535281_HNLN2_matrix.mtx.gz: {'medium': 32737, 'fast': 32738}
WARNING:root:Cell count mismatch in projects/GSE124494/matrices/GSE124494_RAW__GSM3535276_AXLN1_matrix.mtx.gz: {'medium': 8650, 'fast': 8651}
WARNING:root:Gene count mismatch in projects/GSE124494/matrices/GSE124494_RAW__GSM3535276_AXLN1_matrix.mtx.gz: {'medium': 32737, 'fast': 32738}
WARNING:root:Cell count mismatch in projects/GSE124494: {'medium': 33251, 'fast': 33257}
WARNING:root:Gene count mismatch in projects/GSE124494: {'medium': 196422, 'fast': 196428}
WARNING:root:Cell count mismatch in projects/GSE108291/matrices/GSE108291_kid_matrix.mtx.gz: {'medium': 2211839, 'fast': 2211840}
WARNING:root:Gene count mismatch in projects/GSE108291/matrices/GSE108291_kid_matrix.mtx.gz: {'medium': 27997, 'fast': 27998}
WARNING:root:Cell count mismatch in projects/GSE108291/matrices/GSE108291_org4_matrix.mtx.gz: {'medium': 1420, 'fast': 1421}
WARNING:root:Gene count mismatch in projects/GSE108291/matrices/GSE108291_org4_matrix.mtx.gz: {'medium': 33693, 'fast': 33694}
WARNING:root:Cell count mismatch in projects/GSE108291: {'medium': 2220263, 'fast': 2220265}
WARNING:root:Gene count mismatch in projects/GSE108291: {'medium': 95384, 'fast': 95386}