Daniel-Mietchen / ideas

A dumping ground for halfbaked ideas, some of which will hopefully be worked on soon
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Select a set of seed papers for ScienceSource #866

Closed Daniel-Mietchen closed 6 years ago

Daniel-Mietchen commented 6 years ago

as per https://www.wikidata.org/wiki/Wikidata:ScienceSource_focus_list .

Daniel-Mietchen commented 6 years ago

One way to go about that would be to take some highly cited papers from journals that have published on medical topics like the Zika virus:

#defaultView:Table
SELECT DISTINCT ?work1 #?number_of_citations
WITH {
  SELECT (count(?work) as ?count) ?venue  WHERE {
    { ?work wdt:P921 wd:Q202864 . }
    ?work wdt:P1433 ?venue .
  }
  GROUP BY ?venue
  LIMIT 20
} AS %zikajournals
WITH {
  SELECT ?work1 (COUNT(?citing_work) AS ?number_of_citations) WHERE {
    INCLUDE %zikajournals
    ?work1 wdt:P1433 ?venue ;
           wdt:P2860 ?cited_work . 
    ?citing_work wdt:P2860 ?work1
  }
  GROUP BY ?work1 
  LIMIT 500000  
} AS %result
WHERE {
  INCLUDE %result
#  SERVICE wikibase:label { bd:serviceParam wikibase:language "en" . } 
}
GROUP BY ?work1 #?number_of_citations
ORDER BY DESC(?number_of_citations)
LIMIT 500

Try it

Daniel-Mietchen commented 6 years ago

This batch is now running: https://tools.wmflabs.org/editgroups/b/QSv2/3149/ .

Daniel-Mietchen commented 6 years ago

The results of the query above seem to differ markedly from the results obtained with uncommented

?number_of_citations

I have thus stopped the batch https://tools.wmflabs.org/quickstatements/#/batch/3149 for now.

Daniel-Mietchen commented 6 years ago

Let's check the items tagged so far, e.g. via the following query:


#defaultView:Table
SELECT ?count ?work ?workLabel
WITH {
  SELECT (count(?citing_work) as ?count) ?work WHERE {
     ?work wdt:P5008 wd:Q55439927 .
    ?citing_work wdt:P2860 ?work .
  }
  GROUP BY ?work
} AS %result
WHERE {
  INCLUDE %result
  SERVICE wikibase:label { bd:serviceParam wikibase:language "en" . } 
}
ORDER BY DESC(?count)
Daniel-Mietchen commented 6 years ago

This gives the following results;

count,work,workLabel
255,http://www.wikidata.org/entity/Q29615571,Evidence for decreasing quality of semen during past 50 years
174,http://www.wikidata.org/entity/Q24642534,"Randomised, double blind, placebo controlled study of fluticasone propionate in patients with moderate to severe chronic obstructive pulmonary disease: the ISOLDE trial"
131,http://www.wikidata.org/entity/Q24634779,Moderate alcohol intake and lower risk of coronary heart disease: meta-analysis of effects on lipids and haemostatic factors
105,http://www.wikidata.org/entity/Q24642039,Rates of medication errors among depressed and burnt out residents: prospective cohort study
100,http://www.wikidata.org/entity/Q24679826,Results of case-control study of leukaemia and lymphoma among young people near Sellafield nuclear plant in West Cumbria
89,http://www.wikidata.org/entity/Q30278455,STARD 2015: an updated list of essential items for reporting diagnostic accuracy studies
80,http://www.wikidata.org/entity/Q24681261,Effect of non-steroidal anti-inflammatory drugs on risk of Alzheimer's disease: systematic review and meta-analysis of observational studies
78,http://www.wikidata.org/entity/Q24645193,Atypical antipsychotics in the treatment of schizophrenia: systematic overview and meta-regression analysis
77,http://www.wikidata.org/entity/Q24681831,Maximum forced expiratory flow rate as a measure of ventilatory capacity: with a description of a new portable instrument for measuring it
66,http://www.wikidata.org/entity/Q24632223,Efficacy of vitamin and antioxidant supplements in prevention of cardiovascular disease: systematic review and meta-analysis of randomised controlled trials
59,http://www.wikidata.org/entity/Q31934155,Association between maternal anxiety in pregnancy and increased uterine artery resistance index: cohort based study.
59,http://www.wikidata.org/entity/Q30353138,Populations at risk for severe or complicated influenza illness: systematic review and meta-analysis
58,http://www.wikidata.org/entity/Q24679605,Getting to grips with Archie Cochrane's agenda
55,http://www.wikidata.org/entity/Q24644585,Neuraminidase inhibitors for preventing and treating influenza in healthy adults: systematic review and meta-analysis
49,http://www.wikidata.org/entity/Q31987815,Random allocation or allocation at random? Patients' perspectives of participation in a randomised controlled trial.
48,http://www.wikidata.org/entity/Q28362638,Randomised controlled trial of structured personal care of type 2 diabetes mellitus
48,http://www.wikidata.org/entity/Q24632255,Reboxetine for acute treatment of major depression: systematic review and meta-analysis of published and unpublished placebo and selective serotonin reuptake inhibitor controlled trials
45,http://www.wikidata.org/entity/Q24634077,"Risk of venous thromboembolism from use of oral contraceptives containing different progestogens and oestrogen doses: Danish cohort study, 2001-9"
42,http://www.wikidata.org/entity/Q30062572,Incidence of malaria among children living near dams in northern Ethiopia: community based incidence survey.
41,http://www.wikidata.org/entity/Q24645342,Probability of adverse events that have not yet occurred: a statistical reminder
39,http://www.wikidata.org/entity/Q28361678,Dietary fat intake and prevention of cardiovascular disease: systematic review
36,http://www.wikidata.org/entity/Q31987799,Analysis and interpretation of cost data in randomised controlled trials: review of published studies.
36,http://www.wikidata.org/entity/Q24681294,Physical interventions to interrupt or reduce the spread of respiratory viruses: systematic review
34,http://www.wikidata.org/entity/Q24634304,Influence of variation in birth weight within normal range and within sibships on IQ at age 7 years: cohort study
30,http://www.wikidata.org/entity/Q24645361,Multicentre trial to introduce the Ottawa ankle rules for use of radiography in acute ankle injuries. Multicentre Ankle Rule Study Group
25,http://www.wikidata.org/entity/Q24681811,Cervical spondylosis and neck pain
24,http://www.wikidata.org/entity/Q28362373,Extrapyramidal reactions with metoclopramide
23,http://www.wikidata.org/entity/Q24645318,Maternal caffeine intake during pregnancy and risk of fetal growth restriction: a large prospective observational study
23,http://www.wikidata.org/entity/Q24642327,Inguinal hernias
22,http://www.wikidata.org/entity/Q30235936,Vitamin D supplementation to prevent acute respiratory tract infections: systematic review and meta-analysis of individual participant data.
19,http://www.wikidata.org/entity/Q28362081,"Compliance, satisfaction, and quality of life of patients with colorectal cancer receiving home chemotherapy or outpatient treatment: a randomised controlled trial"
19,http://www.wikidata.org/entity/Q24679717,Metastases and the normalization of tumour blood vessels by ICRF 159: a new type of drug action
18,http://www.wikidata.org/entity/Q24630476,Diagnostic accuracy of conventional or age adjusted D-dimer cut-off values in older patients with suspected venous thromboembolism: systematic review and meta-analysis
16,http://www.wikidata.org/entity/Q24679596,The neuropsychiatry of megaloblastic anaemia
15,http://www.wikidata.org/entity/Q24681732,"Flucloxacillin, a new isoxazolyl penicillin, compared with oxacillin, cloxacillin, and dicloxacillin"
15,http://www.wikidata.org/entity/Q24680986,Requests for cosmetic genitoplasty: how should healthcare providers respond?
15,http://www.wikidata.org/entity/Q24634720,Systematic review of efficacy of cognitive behaviour therapies in childhood and adolescent depressive disorder
14,http://www.wikidata.org/entity/Q30240765,Association between prediabetes and risk of cardiovascular disease and all cause mortality: systematic review and meta-analysis.
14,http://www.wikidata.org/entity/Q30234647,Mortality risk during and after opioid substitution treatment: systematic review and meta-analysis of cohort studies
13,http://www.wikidata.org/entity/Q30235518,Adiposity and cancer at major anatomical sites: umbrella review of the literature
13,http://www.wikidata.org/entity/Q28362085,"Fatigue, alcohol, and serious road crashes in France: factorial study of national data"
13,http://www.wikidata.org/entity/Q24630340,Mortality over two centuries in large pedigree with familial hypercholesterolaemia: family tree mortality study
12,http://www.wikidata.org/entity/Q31918370,Retrospective analysis of census data on general practitioners who qualified in South Asia: who will replace them as they retire?
11,http://www.wikidata.org/entity/Q24633933,Effectiveness of vertebroplasty using individual patient data from two randomised placebo controlled trials: meta-analysis
10,http://www.wikidata.org/entity/Q30156623,Moderate alcohol consumption as risk factor for adverse brain outcomes and cognitive decline: longitudinal cohort study
10,http://www.wikidata.org/entity/Q24682142,Dressings for venous leg ulcers: systematic review and meta-analysis
10,http://www.wikidata.org/entity/Q24679652,Collecting and banking human milk: to heat or not to heat?
9,http://www.wikidata.org/entity/Q30353586,An iatrogenic pandemic of panic.
9,http://www.wikidata.org/entity/Q30051635,The long term clinical course of acute deep vein thrombosis of the arm: prospective cohort study
8,http://www.wikidata.org/entity/Q31160535,Exposure to low dose computed tomography for lung cancer screening and risk of cancer: secondary analysis of trial data and risk-benefit analysis
8,http://www.wikidata.org/entity/Q28362339,Thyroxine treatment in patients with symptoms of hypothyroidism but thyroid function tests within the reference range: randomised double blind placebo controlled crossover trial
8,http://www.wikidata.org/entity/Q24681817,Hypertension and the kidney. II. Experimental basis of renal hypertension
8,http://www.wikidata.org/entity/Q24645303,"Mortality on Mount Everest, 1921-2006: descriptive study"
8,http://www.wikidata.org/entity/Q24645227,The incidence of malaria after splenectomy in Papua New Guinea
8,http://www.wikidata.org/entity/Q24633902,Bullying in school: are short pupils at risk? Questionnaire study in a cohort
7,http://www.wikidata.org/entity/Q30332166,Quality improvement report: Effect of a multifaceted approach to detecting and managing depression in primary care
7,http://www.wikidata.org/entity/Q30234512,Risk of acute myocardial infarction with NSAIDs in real world use: bayesian meta-analysis of individual patient data.
7,http://www.wikidata.org/entity/Q28362362,Death and blindness due to overdose of quinine
7,http://www.wikidata.org/entity/Q24679751,Food poisoning from raw red kidney beans
7,http://www.wikidata.org/entity/Q24679690,Randomised controlled trial of breast shells and Hoffman's exercises for inverted and non-protractile nipples
7,http://www.wikidata.org/entity/Q24679666,Wernicke's encephalopathy and central pontine myelinolysis associated with hyperemesis gravidarum
7,http://www.wikidata.org/entity/Q24634635,Magnetic resonance imaging of male and female genitals during coitus and female sexual arousal
6,http://www.wikidata.org/entity/Q30235881,Impact of searching clinical trial registries in systematic reviews of pharmaceutical treatments: methodological systematic review and reanalysis of meta-analyses
6,http://www.wikidata.org/entity/Q28362343,Systematic review of clinical effectiveness of pressurised metered dose inhalers versus other hand held inhaler devices for delivering corticosteroids in asthma
6,http://www.wikidata.org/entity/Q24681556,Exercise and heart disease; a study in regional circulation
6,http://www.wikidata.org/entity/Q24681276,Tension-type headache
6,http://www.wikidata.org/entity/Q24645202,Fungal nail disease: a guide to good practice (report of a Working Group of the British Society for Medical Mycology)
6,http://www.wikidata.org/entity/Q24633769,Comparative efficacy of three mumps vaccines during disease outbreak in Eastern Switzerland: cohort study
5,http://www.wikidata.org/entity/Q31976406,Bladder cancer
5,http://www.wikidata.org/entity/Q31934143,Outcome of neonatal hypoglycaemia. Complete data are needed
5,http://www.wikidata.org/entity/Q24681873,Auto-immune disease. I. Modern immunological concepts
5,http://www.wikidata.org/entity/Q24681844,Kidneys on demand
5,http://www.wikidata.org/entity/Q24681789,Cancer chemotherapy--the first twenty-five years
5,http://www.wikidata.org/entity/Q24681775,Resolution of pulmonary embolism
4,http://www.wikidata.org/entity/Q31160664,Why should doctors be interested in climate change?
4,http://www.wikidata.org/entity/Q28362367,Non-oliguric renal failure during treatment with mefenamic acid in elderly patients: a continuing problem.
4,http://www.wikidata.org/entity/Q24680999,Lower abdominal pain in women after binge drinking
4,http://www.wikidata.org/entity/Q24679828,Fluoroquinolone resistance in Salmonella Typhi
3,http://www.wikidata.org/entity/Q30353584,Using lessons from the past to plan for pandemic flu.
3,http://www.wikidata.org/entity/Q30196174,Benefits of effective hospital services for elderly people.
3,http://www.wikidata.org/entity/Q28362312,"Persistent nephrogenic diabetes insipidus, hyperparathyroidism, and hypothyroidism after lithium treatment."
3,http://www.wikidata.org/entity/Q24681046,Blue rubber bleb naevus
3,http://www.wikidata.org/entity/Q24679623,"""Gold standard"" is an appropriate term"
3,http://www.wikidata.org/entity/Q24645167,ABC of atrial fibrillation. Drugs for atrial fibrillation
3,http://www.wikidata.org/entity/Q24645002,Improving uptake of MMR vaccine
2,http://www.wikidata.org/entity/Q31962811,"Effect of adding selegiline to levodopa in early, mild Parkinson's disease. Formal systematic review of data on patients in all relevant trials is required."
2,http://www.wikidata.org/entity/Q30238785,Inter-rater agreement in evaluation of disability: systematic review of reproducibility studies.
2,http://www.wikidata.org/entity/Q29994664,Exploring changes over time and characteristics associated with data retrieval across individual participant data meta-analyses: systematic review
2,http://www.wikidata.org/entity/Q28362370,Fast atrial fibrillation induced by treatment of psoriasis with azathioprine.
2,http://www.wikidata.org/entity/Q28362351,Lactulose may help prevent urinary tract infections.
2,http://www.wikidata.org/entity/Q28362350,Torsade de pointes induced by sotalol despite therapeutic plasma sotalol concentrations.
2,http://www.wikidata.org/entity/Q24681841,Accidental injection of thiopentone into arteries: studies of pathology and treatment
2,http://www.wikidata.org/entity/Q24681746,Endocrine function in male and female homosexuals
2,http://www.wikidata.org/entity/Q24679613,Prospective study of effect of fenclofenac on thyroid function tests
1,http://www.wikidata.org/entity/Q31942626,Meta-analyses of observational data should be done with due care.
1,http://www.wikidata.org/entity/Q30304553,Alliteration in medicine: a puzzling profusion of p's.
1,http://www.wikidata.org/entity/Q30235065,Low intensity pulsed ultrasound for bone healing: systematic review of randomized controlled trials
1,http://www.wikidata.org/entity/Q30230304,Preparedness for humanitarian crises needs to be improved
1,http://www.wikidata.org/entity/Q28362600,Drug points: Benign intracranial hypertension secondary to nasal fluticasone propionate
1,http://www.wikidata.org/entity/Q28362346,Systematic review of clinical effectiveness of pressurised metered dose inhalers versus other hand held inhaler devices for delivering beta (2 )agonists bronchodilators in asthma
1,http://www.wikidata.org/entity/Q24681884,Use of premixed pethidine and antagonists in obstetrical analgesia; with special reference to cases in which levallorphan was used
1,http://www.wikidata.org/entity/Q24679723,Calcium sensitisers
1,http://www.wikidata.org/entity/Q24679676,Finger wrinkling after immersion in water
1,http://www.wikidata.org/entity/Q24679638,Frequency of citation and outcome of cholesterol lowering trials
1,http://www.wikidata.org/entity/Q24645369,Human-milk Intoxication due to B1 Avitaminosis
1,http://www.wikidata.org/entity/Q24634754,Scarring in Molluscum contagiosum: comparison of physical expression and phenol ablation
1,http://www.wikidata.org/entity/Q24634625,"Shaken, not stirred: bioanalytical study of the antioxidant activities of martinis"
Daniel-Mietchen commented 6 years ago

Together, that's 107 results, which is precisely the number of edits made by the batch above and means that nobody else has tagged items for ScienceSource yet.

Daniel-Mietchen commented 6 years ago

Now let's add the ?number_of_citations back in:

#defaultView:Table
SELECT DISTINCT ?work1 ?number_of_citations
WITH {
  SELECT (count(?work) as ?count) ?venue  WHERE {
    { ?work wdt:P921 wd:Q202864 . }
    ?work wdt:P1433 ?venue .
  }
  GROUP BY ?venue
  LIMIT 20
} AS %zikajournals
WITH {
  SELECT ?work1 (COUNT(?citing_work) AS ?number_of_citations) WHERE {
    INCLUDE %zikajournals
    ?work1 wdt:P1433 ?venue ;
           wdt:P2860 ?cited_work . 
    ?citing_work wdt:P2860 ?work1
  }
  GROUP BY ?work1 
  LIMIT 500000  
} AS %result
WHERE {
  INCLUDE %result
#  SERVICE wikibase:label { bd:serviceParam wikibase:language "en" . } 
}
GROUP BY ?work1 ?number_of_citations
ORDER BY DESC(?number_of_citations)
LIMIT 500

Try it

Daniel-Mietchen commented 6 years ago

The results:

work1,number_of_citations
http://www.wikidata.org/entity/Q25938983,684920
http://www.wikidata.org/entity/Q24550675,281100
http://www.wikidata.org/entity/Q22122150,237975
http://www.wikidata.org/entity/Q27860879,199290
http://www.wikidata.org/entity/Q21061203,194996
http://www.wikidata.org/entity/Q22242276,191110
http://www.wikidata.org/entity/Q24649640,145348
http://www.wikidata.org/entity/Q22122198,141912
http://www.wikidata.org/entity/Q22122524,136630
http://www.wikidata.org/entity/Q24679827,132160
http://www.wikidata.org/entity/Q24617794,118530
http://www.wikidata.org/entity/Q24630844,107856
http://www.wikidata.org/entity/Q22122153,98280
http://www.wikidata.org/entity/Q27860621,92910
http://www.wikidata.org/entity/Q24606586,92340
http://www.wikidata.org/entity/Q24604760,91760
http://www.wikidata.org/entity/Q29615565,90160
http://www.wikidata.org/entity/Q27860902,84480
http://www.wikidata.org/entity/Q24656128,74442
http://www.wikidata.org/entity/Q24598394,72512
http://www.wikidata.org/entity/Q29547314,68935
http://www.wikidata.org/entity/Q29547191,66960
http://www.wikidata.org/entity/Q24609428,65580
http://www.wikidata.org/entity/Q27860518,65352
http://www.wikidata.org/entity/Q24658083,63568
http://www.wikidata.org/entity/Q24595707,63020
http://www.wikidata.org/entity/Q26782024,61814
http://www.wikidata.org/entity/Q24651939,61230
http://www.wikidata.org/entity/Q24632506,60931
http://www.wikidata.org/entity/Q29547552,60039
http://www.wikidata.org/entity/Q24630415,60021
http://www.wikidata.org/entity/Q27861062,58728
http://www.wikidata.org/entity/Q24618931,57608
http://www.wikidata.org/entity/Q29547358,54636
http://www.wikidata.org/entity/Q29547914,54390
http://www.wikidata.org/entity/Q24595378,53256
http://www.wikidata.org/entity/Q29620350,52690
http://www.wikidata.org/entity/Q24634688,51475
http://www.wikidata.org/entity/Q29616834,50854
http://www.wikidata.org/entity/Q24653549,49182
http://www.wikidata.org/entity/Q27860857,49000
http://www.wikidata.org/entity/Q28083357,46784
http://www.wikidata.org/entity/Q24633677,46440
http://www.wikidata.org/entity/Q24633070,45507
http://www.wikidata.org/entity/Q24561833,45449
http://www.wikidata.org/entity/Q22065895,44457
http://www.wikidata.org/entity/Q24648860,44418
http://www.wikidata.org/entity/Q29547696,44307
http://www.wikidata.org/entity/Q27861118,44022
http://www.wikidata.org/entity/Q29619918,42828
http://www.wikidata.org/entity/Q27860948,42476
http://www.wikidata.org/entity/Q24642106,41736
http://www.wikidata.org/entity/Q24657484,41601
http://www.wikidata.org/entity/Q22122237,41370
http://www.wikidata.org/entity/Q24669850,40716
http://www.wikidata.org/entity/Q29616286,40410
http://www.wikidata.org/entity/Q29614943,39960
http://www.wikidata.org/entity/Q24628768,39746
http://www.wikidata.org/entity/Q28032481,39712
http://www.wikidata.org/entity/Q27759364,39644
http://www.wikidata.org/entity/Q29617829,39432
http://www.wikidata.org/entity/Q27860535,38114
http://www.wikidata.org/entity/Q30353189,37638
http://www.wikidata.org/entity/Q29614325,37620
http://www.wikidata.org/entity/Q24649648,37548
http://www.wikidata.org/entity/Q22251092,37114
http://www.wikidata.org/entity/Q24617331,36666
http://www.wikidata.org/entity/Q29614938,36652
http://www.wikidata.org/entity/Q27028155,36515
http://www.wikidata.org/entity/Q29615679,36331
http://www.wikidata.org/entity/Q29616446,36308
http://www.wikidata.org/entity/Q24596270,36176
http://www.wikidata.org/entity/Q29619504,36138
http://www.wikidata.org/entity/Q25909434,35665
http://www.wikidata.org/entity/Q29547648,35640
http://www.wikidata.org/entity/Q22122468,35504
http://www.wikidata.org/entity/Q28274701,35200
http://www.wikidata.org/entity/Q29620058,35155
http://www.wikidata.org/entity/Q29616778,34874
http://www.wikidata.org/entity/Q24606006,34815
http://www.wikidata.org/entity/Q29619003,34144
http://www.wikidata.org/entity/Q29547467,34136
http://www.wikidata.org/entity/Q22305005,34068
http://www.wikidata.org/entity/Q24607308,34020
http://www.wikidata.org/entity/Q27861053,33720
http://www.wikidata.org/entity/Q28274959,33567
http://www.wikidata.org/entity/Q29616350,33352
http://www.wikidata.org/entity/Q28262647,33300
http://www.wikidata.org/entity/Q24544260,33072
http://www.wikidata.org/entity/Q29619448,33065
http://www.wikidata.org/entity/Q24599191,33019
http://www.wikidata.org/entity/Q29547661,32982
http://www.wikidata.org/entity/Q24644573,32712
http://www.wikidata.org/entity/Q29614654,32648
http://www.wikidata.org/entity/Q29617990,32524
http://www.wikidata.org/entity/Q24648102,32472
http://www.wikidata.org/entity/Q26831376,32256
http://www.wikidata.org/entity/Q24626370,31968
http://www.wikidata.org/entity/Q24631953,31856
http://www.wikidata.org/entity/Q29615106,31808
http://www.wikidata.org/entity/Q24656261,31434
http://www.wikidata.org/entity/Q36438720,31395
http://www.wikidata.org/entity/Q24633113,31062
http://www.wikidata.org/entity/Q29547643,31050
http://www.wikidata.org/entity/Q24489818,30532
http://www.wikidata.org/entity/Q29615797,30450
http://www.wikidata.org/entity/Q29618873,30267
http://www.wikidata.org/entity/Q24650949,30240
http://www.wikidata.org/entity/Q24641887,30120
http://www.wikidata.org/entity/Q28131819,29978
http://www.wikidata.org/entity/Q22122488,29859
http://www.wikidata.org/entity/Q24316558,29785
http://www.wikidata.org/entity/Q28131802,29652
http://www.wikidata.org/entity/Q29617481,29547
http://www.wikidata.org/entity/Q29615083,29512
http://www.wikidata.org/entity/Q36407511,29370
http://www.wikidata.org/entity/Q22250892,29316
http://www.wikidata.org/entity/Q27860950,29295
http://www.wikidata.org/entity/Q27348355,29145
http://www.wikidata.org/entity/Q34698385,28975
http://www.wikidata.org/entity/Q29614895,28864
http://www.wikidata.org/entity/Q34475541,28853
http://www.wikidata.org/entity/Q27860720,28834
http://www.wikidata.org/entity/Q29547454,28823
http://www.wikidata.org/entity/Q34712340,28792
http://www.wikidata.org/entity/Q28235102,28750
http://www.wikidata.org/entity/Q29615735,28600
http://www.wikidata.org/entity/Q24629338,28558
http://www.wikidata.org/entity/Q24635327,28308
http://www.wikidata.org/entity/Q22122484,28292
http://www.wikidata.org/entity/Q28182890,28290
http://www.wikidata.org/entity/Q24620449,28188
http://www.wikidata.org/entity/Q27025671,28028
http://www.wikidata.org/entity/Q29547841,27390
http://www.wikidata.org/entity/Q24632651,27307
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Daniel-Mietchen commented 6 years ago

I am running this set of articles as https://tools.wmflabs.org/quickstatements/#/batch/3150 .

Daniel-Mietchen commented 6 years ago

I left a note at https://www.wikidata.org/wiki/Wikidata:Edit_groups/QSv2/3149 .

Daniel-Mietchen commented 6 years ago

One of the reasons I ran the query as outlined above is that I could not get the FILTER function to work, i.e. lines like

    FILTER (?number_of_citations > 1000)

added to the query always yielded zero results, even though multiple works with more than 1000 citations were contained in the corpus.

Daniel-Mietchen commented 6 years ago

I pinged WikidataFacts on the FILTER issue.

Daniel-Mietchen commented 6 years ago

ScienceSource aims at mining 30k papers eventually, so this set of a few hundred is just meant as a starting point. I also haven't checked these papers for licensing or availability of minable copies.

Daniel-Mietchen commented 6 years ago

One way to bias the corpus towards minable articles would of course be to look only at items that have a PMCID.

Daniel-Mietchen commented 6 years ago

One way to filter for articles relevant to WikiProject Medicine would be to look at items tagged for https://www.wikidata.org/wiki/Wikidata:WikiProject_Wikipedia_Sources . However, that tagging is not complete yet.

Daniel-Mietchen commented 6 years ago

The batch https://tools.wmflabs.org/quickstatements/#/batch/3150 is finished now.

Daniel-Mietchen commented 6 years ago

Regarding the FILTER issue, the solution is to use HAVING.

Noted in https://github.com/Daniel-Mietchen/learning2code/commit/d73738395cdda3d3c22ad3a64c4ed83627010c3b .