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Danko-Lab / dREG

Detecting Regulatory Elements using GRO-seq and PRO-seq
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asvm.RData #4

Closed azofeifa closed 8 years ago

azofeifa commented 8 years ago

Hi I am trying to run dREG on PRO-seq data. I understand I need the parameter file from the trained SVM. In the bash script, this is

asvm.RData

but can't seem to find/missed it somewhere in the github directories?

Thank you very much! Looking forward to getting this up and running! cheers!

azofeifa commented 8 years ago

ah! I found what look like dREG models at

https://github.com/Danko-Lab/dREG-Model

are these correct? cheers

dankoc commented 8 years ago

Exactly right. Keeping these large binary files in the same git repo runs the risk of causing problems in the long term.

Sorry for the confusion!