Verify that the hand-off to Terra for selected project contains only single-ended data

DataBiosphere / azul

Metadata indexer and query service used for AnVIL, HCA, LungMAP, and CGP

Apache License 2.0

6 stars 2 forks source link

Closed theathorn closed 3 years ago

theathorn commented 3 years ago

Data Browser shows "Paired End = false" for everything in this project.

Slack thread claims the hand-off to Terra contains Paired End data.

Can we inspect the Terra hand-off manifest and verify it's correctness in this regard?

theathorn commented 3 years ago

EBI claiming this is caused by the presence of some "__fastq_read2_drs_url" entries in the hand-off manifest.

hannes-ucsc commented 3 years ago

Can't reproduce