Closed theathorn closed 8 months ago
@hannes-ucsc to define details.
This can be deprioritized since there currently is no snapshot in the corpus in which that table is not empty. Supposedly the upcoming ENCODE snapshot has a non-empty antibody
table. Once we have that snapshot we can look into this. We need to also understand the cardinality of the target
column in order to decide if we'll include it as a property of inner entities, and make it a facet.
Spike to confirm that the antibody table is either empty or absent from all of the snapshots currently on the spreadsheet. If confirmed, we'll park this ticket with a request to be notified by the Broad when a snapshot is added that does have a non-empty antibody table.
The antibody table is present but empty for every snapshot currently on the spreadsheet (rows 3-83).
@bvizzier-ucsc to confirm point person at the Broad.
Check with Nate Calvanese.
Noa asked Nate here: https://ucsc-gi.slack.com/archives/C03TPJS54DC/p1691022243067239
No response. We have too much else to do.
Add an outer and inner entity type called
antibody
using the table of the same name. Index that table'starget
column into a property of the same name in inner and outer entities of typeantibody
. Discover rows in that table by traversing the relation from theassayactivity
table.