[HCA DX] Filter by atlas

MillenniumFalconMechanic commented 1 year ago

Need

Add an Atlas filter and Atlas column to the project index page.

Approach

See mocks:

Map the atlas filter to termFacets.tissueAtlas in the /projects response from Azul.
Map the atlas column to hits.projects.tissueAtlas in the projects response from Azul; display as ${tissueAtlas.atlas} ${tissueAtlas.version}.
Add a new group to the top of the filters called "Atlas"; add Atlas and Biological Network to this group.
Filter display name is Altas (not Atlases in current branch).
Filter values are ${atlas} ${version} values pulled from tissueAtlas.
Filter request parameter format is filters={"tissueAtlas":{"is":[{"atlas": "Lung", "version": "v1.0"}]}} (and not the standard filters={"tissueAtlas":{"is":["Lung"]}}). For example, this request.
See the Tracker app for an example of including an icon in a cell value.

Notes

Functionality started on jonah/3341-hca-dx-filter-by-atlas branch with corresponding draft PR. (See Slack.)

jpaten commented 2 months ago

Hi @MillenniumFalconMechanic! Should the new Atlases column be visible by default, or should it be hidden?

jpaten commented 2 months ago

Also, since the filters on the mock don't match the current groups present on the dev site, what categoryGroup should the Atlas filter fall under?

MillenniumFalconMechanic commented 2 months ago

Should the new Atlases column be visible by default, or should it be hidden?

what categoryGroup should the Atlas filter fall under

Hi @jpaten, thank you for these q's! I have updated the task description above.

NoopDog commented 2 weeks ago

Hi @frano-m, can you add what is blocking this on the ticket? Thanks!

MillenniumFalconMechanic commented 1 week ago

termFacets.tissueAtlas is missing version information:

Version information is however included in hits.projects.tissueAtlas:

DataBiosphere / data-browser