[IA-4996] WIP: Deploy Jupyter on AKS

[lucymcnatt]

Jira ticket: https://broadworkbench.atlassian.net/browse/IA-4996

Dependencies

https://github.com/broadinstitute/terra-helmfile/pull/5659

Summary of changes

What

-

Why

-

Testing these changes

What to test

Who tested and where

• [ ] This change is covered by automated tests
  • NB: Rerun automation tests on this PR by commenting jenkins retest or jenkins multi-test.
• [ ] I validated this change
• [ ] Primary reviewer validated this change
• [ ] I validated this change in the dev environment

[codecov[bot]]

Codecov Report

Attention: Patch coverage is 25.30120% with 62 lines in your changes missing coverage. Please review.

Project coverage is 73.69%. Comparing base (f9df012) to head (b43b9f5). Report is 8 commits behind head on develop.

Additional details and impacted files

[](https://app.codecov.io/gh/DataBiosphere/leonardo/pull/4678?src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=DataBiosphere) ```diff @@ Coverage Diff @@ ## develop #4678 +/- ## ============================================ + Coverage 0 73.69% +73.69% ============================================ Files 0 161 +161 Lines 0 15079 +15079 Branches 0 1222 +1222 ============================================ + Hits 0 11112 +11112 - Misses 0 3967 +3967 ``` | [Files](https://app.codecov.io/gh/DataBiosphere/leonardo/pull/4678?dropdown=coverage&src=pr&el=tree&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=DataBiosphere) | Coverage Δ | | |---|---|---| | [...dsde/workbench/leonardo/auth/SamAuthProvider.scala](https://app.codecov.io/gh/DataBiosphere/leonardo/pull/4678?src=pr&el=tree&filepath=http%2Fsrc%2Fmain%2Fscala%2Forg%2Fbroadinstitute%2Fdsde%2Fworkbench%2Fleonardo%2Fauth%2FSamAuthProvider.scala&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=DataBiosphere#diff-aHR0cC9zcmMvbWFpbi9zY2FsYS9vcmcvYnJvYWRpbnN0aXR1dGUvZHNkZS93b3JrYmVuY2gvbGVvbmFyZG8vYXV0aC9TYW1BdXRoUHJvdmlkZXIuc2NhbGE=) | `58.95% <100.00%> (ø)` | | | [...rkbench/leonardo/http/AppDependenciesBuilder.scala](https://app.codecov.io/gh/DataBiosphere/leonardo/pull/4678?src=pr&el=tree&filepath=http%2Fsrc%2Fmain%2Fscala%2Forg%2Fbroadinstitute%2Fdsde%2Fworkbench%2Fleonardo%2Fhttp%2FAppDependenciesBuilder.scala&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=DataBiosphere#diff-aHR0cC9zcmMvbWFpbi9zY2FsYS9vcmcvYnJvYWRpbnN0aXR1dGUvZHNkZS93b3JrYmVuY2gvbGVvbmFyZG8vaHR0cC9BcHBEZXBlbmRlbmNpZXNCdWlsZGVyLnNjYWxh) | `97.88% <100.00%> (ø)` | | | [...te/dsde/workbench/leonardo/http/ConfigReader.scala](https://app.codecov.io/gh/DataBiosphere/leonardo/pull/4678?src=pr&el=tree&filepath=http%2Fsrc%2Fmain%2Fscala%2Forg%2Fbroadinstitute%2Fdsde%2Fworkbench%2Fleonardo%2Fhttp%2FConfigReader.scala&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=DataBiosphere#diff-aHR0cC9zcmMvbWFpbi9zY2FsYS9vcmcvYnJvYWRpbnN0aXR1dGUvZHNkZS93b3JrYmVuY2gvbGVvbmFyZG8vaHR0cC9Db25maWdSZWFkZXIuc2NhbGE=) | `100.00% <ø> (ø)` | | | [...ch/leonardo/http/service/LeoAppServiceInterp.scala](https://app.codecov.io/gh/DataBiosphere/leonardo/pull/4678?src=pr&el=tree&filepath=http%2Fsrc%2Fmain%2Fscala%2Forg%2Fbroadinstitute%2Fdsde%2Fworkbench%2Fleonardo%2Fhttp%2Fservice%2FLeoAppServiceInterp.scala&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=DataBiosphere#diff-aHR0cC9zcmMvbWFpbi9zY2FsYS9vcmcvYnJvYWRpbnN0aXR1dGUvZHNkZS93b3JrYmVuY2gvbGVvbmFyZG8vaHR0cC9zZXJ2aWNlL0xlb0FwcFNlcnZpY2VJbnRlcnAuc2NhbGE=) | `86.96% <100.00%> (ø)` | | | [...h/leonardo/http/service/RuntimeServiceInterp.scala](https://app.codecov.io/gh/DataBiosphere/leonardo/pull/4678?src=pr&el=tree&filepath=http%2Fsrc%2Fmain%2Fscala%2Forg%2Fbroadinstitute%2Fdsde%2Fworkbench%2Fleonardo%2Fhttp%2Fservice%2FRuntimeServiceInterp.scala&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=DataBiosphere#diff-aHR0cC9zcmMvbWFpbi9zY2FsYS9vcmcvYnJvYWRpbnN0aXR1dGUvZHNkZS93b3JrYmVuY2gvbGVvbmFyZG8vaHR0cC9zZXJ2aWNlL1J1bnRpbWVTZXJ2aWNlSW50ZXJwLnNjYWxh) | `87.54% <100.00%> (ø)` | | | [.../dsde/workbench/leonardo/util/GKEInterpreter.scala](https://app.codecov.io/gh/DataBiosphere/leonardo/pull/4678?src=pr&el=tree&filepath=http%2Fsrc%2Fmain%2Fscala%2Forg%2Fbroadinstitute%2Fdsde%2Fworkbench%2Fleonardo%2Futil%2FGKEInterpreter.scala&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=DataBiosphere#diff-aHR0cC9zcmMvbWFpbi9zY2FsYS9vcmcvYnJvYWRpbnN0aXR1dGUvZHNkZS93b3JrYmVuY2gvbGVvbmFyZG8vdXRpbC9HS0VJbnRlcnByZXRlci5zY2FsYQ==) | `59.97% <ø> (ø)` | | | [.../dsde/workbench/leonardo/util/GceInterpreter.scala](https://app.codecov.io/gh/DataBiosphere/leonardo/pull/4678?src=pr&el=tree&filepath=http%2Fsrc%2Fmain%2Fscala%2Forg%2Fbroadinstitute%2Fdsde%2Fworkbench%2Fleonardo%2Futil%2FGceInterpreter.scala&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=DataBiosphere#diff-aHR0cC9zcmMvbWFpbi9zY2FsYS9vcmcvYnJvYWRpbnN0aXR1dGUvZHNkZS93b3JrYmVuY2gvbGVvbmFyZG8vdXRpbC9HY2VJbnRlcnByZXRlci5zY2FsYQ==) | `66.83% <ø> (ø)` | | | [...institute/dsde/workbench/leonardo/diskModels.scala](https://app.codecov.io/gh/DataBiosphere/leonardo/pull/4678?src=pr&el=tree&filepath=core%2Fsrc%2Fmain%2Fscala%2Forg%2Fbroadinstitute%2Fdsde%2Fworkbench%2Fleonardo%2FdiskModels.scala&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=DataBiosphere#diff-Y29yZS9zcmMvbWFpbi9zY2FsYS9vcmcvYnJvYWRpbnN0aXR1dGUvZHNkZS93b3JrYmVuY2gvbGVvbmFyZG8vZGlza01vZGVscy5zY2FsYQ==) | `31.81% <0.00%> (ø)` | | | [...itute/dsde/workbench/leonardo/app/AppInstall.scala](https://app.codecov.io/gh/DataBiosphere/leonardo/pull/4678?src=pr&el=tree&filepath=http%2Fsrc%2Fmain%2Fscala%2Forg%2Fbroadinstitute%2Fdsde%2Fworkbench%2Fleonardo%2Fapp%2FAppInstall.scala&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=DataBiosphere#diff-aHR0cC9zcmMvbWFpbi9zY2FsYS9vcmcvYnJvYWRpbnN0aXR1dGUvZHNkZS93b3JrYmVuY2gvbGVvbmFyZG8vYXBwL0FwcEluc3RhbGwuc2NhbGE=) | `22.22% <0.00%> (ø)` | | | [...orkbench/leonardo/config/KubernetesAppConfig.scala](https://app.codecov.io/gh/DataBiosphere/leonardo/pull/4678?src=pr&el=tree&filepath=http%2Fsrc%2Fmain%2Fscala%2Forg%2Fbroadinstitute%2Fdsde%2Fworkbench%2Fleonardo%2Fconfig%2FKubernetesAppConfig.scala&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=DataBiosphere#diff-aHR0cC9zcmMvbWFpbi9zY2FsYS9vcmcvYnJvYWRpbnN0aXR1dGUvZHNkZS93b3JrYmVuY2gvbGVvbmFyZG8vY29uZmlnL0t1YmVybmV0ZXNBcHBDb25maWcuc2NhbGE=) | `97.87% <80.00%> (ø)` | | | ... and [7 more](https://app.codecov.io/gh/DataBiosphere/leonardo/pull/4678?src=pr&el=tree-more&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=DataBiosphere) | | ... and [144 files with indirect coverage changes](https://app.codecov.io/gh/DataBiosphere/leonardo/pull/4678/indirect-changes?src=pr&el=tree-more&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=DataBiosphere) ------ [Continue to review full report in Codecov by Sentry](https://app.codecov.io/gh/DataBiosphere/leonardo/pull/4678?dropdown=coverage&src=pr&el=continue&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=DataBiosphere). > **Legend** - [Click here to learn more](https://docs.codecov.io/docs/codecov-delta?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=DataBiosphere) > `Δ = absolute (impact)`, `ø = not affected`, `? = missing data` > Powered by [Codecov](https://app.codecov.io/gh/DataBiosphere/leonardo/pull/4678?dropdown=coverage&src=pr&el=footer&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=DataBiosphere). Last update [f9df012...b43b9f5](https://app.codecov.io/gh/DataBiosphere/leonardo/pull/4678?dropdown=coverage&src=pr&el=lastupdated&utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=DataBiosphere). Read the [comment docs](https://docs.codecov.io/docs/pull-request-comments?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=DataBiosphere).