cwl: expose cwltool's --relax-path-checks option

DataBiosphere / toil

A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.

http://toil.ucsc-cgl.org/.

Apache License 2.0

893 stars 241 forks source link

Closed mr-c closed 4 years ago

mr-c commented 7 years ago

Would allow for filenames with : and other non-standard characters in them

┆Issue is synchronized with this Jira Story ┆Issue Number: TOIL-182

sgosline commented 5 years ago

Any updates on this? It seems to come up trying to use toil with vep files.

adamnovak commented 5 years ago

@jeffrey856 Did you come across this option while working on #2718 to fix #2613? Could you maybe tack it on to that PR if not?

DailyDreaming commented 4 years ago

This is fixed.