Open manabuishii opened 1 year ago
I'll test entire code.
I think --retryCount
also works fine.
Issued job 'CWLJob' dfast-filelist.cwl.28.dfast.cwl kind-CWLJob/instance-92yuu2x8 v1 with job batch system ID: 101 and disk: 1.0 Gi, memory: 13.0 Gi, cores: 1.0, accelerators: [], preemptible: False
Issued job 'CWLJob' dfast-filelist.cwl.9.dfast.cwl kind-CWLJob/instance-pbihqqjg v1 with job batch system ID: 102 and disk: 1.0 Gi, memory: 13.0 Gi, cores: 1.0, accelerators: [], preemptible: False
Job failed with exit value 1: 'CWLJob' dfast-filelist.cwl.16.dfast.cwl kind-CWLJob/instance-40zznj18 v1
Exit reason: None
No log file is present, despite job failing: 'CWLJob' dfast-filelist.cwl.16.dfast.cwl kind-CWLJob/instance-40zznj18 v1
Due to failure we are reducing the remaining try count of job 'CWLJob' dfast-filelist.cwl.16.dfast.cwl kind-CWLJob/instance-40zznj18 v1 with ID kind-CWLJob/instance-40zznj18 to 3
Issued job 'CWLJob' dfast-filelist.cwl.16.dfast.cwl kind-CWLJob/instance-40zznj18 v2 with job batch system ID: 103 and disk: 1.0 Gi, memory: 13.0 Gi, cores: 1.0, accelerators: [], preemptible: False
Job failed with exit value 1: 'CWLJob' dfast-filelist.cwl.25.dfast.cwl kind-CWLJob/instance-lhuoiika v1
Exit reason: None
No log file is present, despite job failing: 'CWLJob' dfast-filelist.cwl.25.dfast.cwl kind-CWLJob/instance-lhuoiika v1
Due to failure we are reducing the remaining try count of job 'CWLJob' dfast-filelist.cwl.25.dfast.cwl kind-CWLJob/instance-lhuoiika v1 with ID kind-CWLJob/instance-lhuoiika to 3
Issued job 'CWLJob' dfast-filelist.cwl.25.dfast.cwl kind-CWLJob/instance-lhuoiika v2 with job batch system ID: 104 and disk: 1.0 Gi, memory: 13.0 Gi, cores: 1.0, accelerators: [], preemptible: False
Job failed with exit value 1: 'CWLJob' dfast-filelist.cwl.48.dfast.cwl kind-CWLJob/instance-k8lixfj7 v1
Exit reason: None
No log file is present, despite job failing: 'CWLJob' dfast-filelist.cwl.48.dfast.cwl kind-CWLJob/instance-k8lixfj7 v1
Due to failure we are reducing the remaining try count of job 'CWLJob' dfast-filelist.cwl.48.dfast.cwl kind-CWLJob/instance-k8lixfj7 v1 with ID kind-CWLJob/instance-k8lixfj7 to 3
Issued job 'CWLJob' dfast-filelist.cwl.48.dfast.cwl kind-CWLJob/instance-k8lixfj7 v2 with job batch system ID: 105 and disk: 1.0 Gi, memory: 13.0 Gi, cores: 1.0, accelerators: [], preemptible: False
Job failed with exit value 1: 'CWLJob' dfast-filelist.cwl.32.dfast.cwl kind-CWLJob/instance-vnt7r2bv v1
Exit reason: None
No log file is present, despite job failing: 'CWLJob' dfast-filelist.cwl.32.dfast.cwl kind-CWLJob/instance-vnt7r2bv v1
Due to failure we are reducing the remaining try count of job 'CWLJob' dfast-filelist.cwl.32.dfast.cwl kind-CWLJob/instance-vnt7r2bv v1 with ID kind-CWLJob/instance-vnt7r2bv to 3
Issued job 'CWLJob' dfast-filelist.cwl.32.dfast.cwl kind-CWLJob/instance-vnt7r2bv v2 with job batch system ID: 106 and disk: 1.0 Gi, memory: 13.0 Gi, cores: 1.0, accelerators: [], preemptible: False
Job failed with exit value 1: 'CWLJob' dfast-filelist.cwl.37.dfast.cwl kind-CWLJob/instance-wb2zftb7 v1
Exit reason: None
No log file is present, despite job failing: 'CWLJob' dfast-filelist.cwl.37.dfast.cwl kind-CWLJob/instance-wb2zftb7 v1
Due to failure we are reducing the remaining try count of job 'CWLJob' dfast-filelist.cwl.37.dfast.cwl kind-CWLJob/instance-wb2zftb7 v1 with ID kind-CWLJob/instance-wb2zftb7 to 3
Issued job 'CWLJob' dfast-filelist.cwl.37.dfast.cwl kind-CWLJob/instance-wb2zftb7 v2 with job batch system ID: 107 and disk: 1.0 Gi, memory: 13.0 Gi, cores: 1.0, accelerators: [], preemptible: False
Job failed with exit value 1: 'CWLJob' dfast-filelist.cwl.15.dfast.cwl kind-CWLJob/instance-xq28p1nm v1
Exit reason: None
No log file is present, despite job failing: 'CWLJob' dfast-filelist.cwl.15.dfast.cwl kind-CWLJob/instance-xq28p1nm v1
Due to failure we are reducing the remaining try count of job 'CWLJob' dfast-filelist.cwl.15.dfast.cwl kind-CWLJob/instance-xq28p1nm v1 with ID kind-CWLJob/instance-xq28p1nm to 3
Issued job 'CWLJob' dfast-filelist.cwl.15.dfast.cwl kind-CWLJob/instance-xq28p1nm v2 with job batch system ID: 108 and disk: 1.0 Gi, memory: 13.0 Gi, cores: 1.0, accelerators: [], preemptible: False
Finished toil run successfully.
I run toil with lustre and Univa Grid Engine.
Sometimes succeded and sometimes fails.
When I rerun, sometimes succeded and sometimes fails.
I faced same things on lustre and slurm.
I set
--retryCount 3
but I think it is not effected.I run several times with
--restart
. finally it becomes success.┆Issue is synchronized with this Jira Story ┆Issue Number: TOIL-1287