This should help with #5162. It doesn't move any tests around yet, but it reduces the number of test runs.
I also already turned off the constraint that branches be back-merged up to current mainline Toil before we merge them, to avoid double-testing the same code represented by different commits. Github doesn't have a squash-test-and-update-mainline-if-passing workflow, so the only way to test just the final commit that goes into the history seems to be to do it after merging.
[ ] New functions or classes without informative docstrings.
[ ] Changes to semantics not reflected in the relevant docstrings.
[ ] New or changed command line options for Toil workflows that are not reflected in docs/running/{cliOptions,cwl,wdl}.rst
[ ] New features without tests.
[ ] Comment on the lines of code where problems exist with a review comment. You can shift-click the line numbers in the diff to select multiple lines.
[ ] Finish the review with an overall description of your opinion.
Merger Checklist
[ ] Make sure the PR passes tests.
[ ] Make sure the PR has been reviewed since its last modification. If not, review it.
[ ] Merge with the Github "Squash and merge" feature.
[ ] If there are multiple authors' commits, add Co-authored-by to give credit to all contributing authors.
[ ] Copy its recommended changelog entry to the Draft Changelog.
[ ] Append the issue number in parentheses to the changelog entry.
This should help with #5162. It doesn't move any tests around yet, but it reduces the number of test runs.
I also already turned off the constraint that branches be back-merged up to current mainline Toil before we merge them, to avoid double-testing the same code represented by different commits. Github doesn't have a squash-test-and-update-mainline-if-passing workflow, so the only way to test just the final commit that goes into the history seems to be to do it after merging.
Changelog Entry
To be copied to the draft changelog by merger:
Reviewer Checklist
issues/XXXX-fix-the-thing
in the Toil repo, or from an external repo.camelCase
that want to be insnake_case
.docs/running/{cliOptions,cwl,wdl}.rst
Merger Checklist