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DataBiosphere / toil

A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.
http://toil.ucsc-cgl.org/.
Apache License 2.0
894 stars 241 forks source link

Create Containers for Workflow Tools #61

Closed jvivian closed 9 years ago

jvivian commented 9 years ago

Samtools PicardTools MuTect SomaticSniper VarScan Pindel

jvivian commented 9 years ago

[x] samtools [x] picardtools [x] mutect [ ] SomaticSniper [ ] VarScan [ ] Pindel https://registry.hub.docker.com/repos/jvivian/

hannes-ucsc commented 9 years ago

Isn't Ashish working on this?

jvivian commented 9 years ago

yes, Aashish is working on that but I couldn't assign him the ticket on waffle and I figured the job still falls under my purview.

On Tue, Jun 23, 2015 at 8:31 PM Hannes Schmidt notifications@github.com wrote:

Isn't Ashish working on this?

— Reply to this email directly or view it on GitHub https://github.com/BD2KGenomics/slugflow/issues/61#issuecomment-114717657 .

hannes-ucsc commented 9 years ago

Should be broken up and assigned between John and Aashish..

jvivian commented 9 years ago

I am closing this ticket and opening several more.