DavHau
commented
4 years ago Thanks for that! You where hitting a bug in printing information about the resolution error. It's fixed now in the dev branch.
Your expression calls mach-nix.buildPythonPackage to build deeplabcut from github but the requirements you put in are not from deeplabcat. Therefore I assume you just copied the expression head from somewhere else and you actually want to build a python environment, not a python package.
I fixed that and tried to run your expression through mach-nix
The error messages I was getting revealed that your requirements contain a lot of conflicts. I guess you used some exporter to retrieve them. (Pip might accept this since pip just ignores conflicts)
I fixed those conflicts one by one, to see if we're hitting any other bugs and found that mach-nix cannot deal witch python packages which have a dot in their name. I fixed this also on the dev branch. Now your environment is working
Fixing the conflicts requires the following changes yo your requirements:
< dask==2.22.0
---
> dask[complete]==2.22.0
78c78
< llvmlite==0.34.0rc1
---
>
103c103
< osmpythontools==0.2.8
---
> osmpythontools
127c127
< pyct==0.4.6
---
> pyct[cmd]==0.4.6
149c149
< rasterio==1.1.5
---
> rasterio[s3]==1.1.5The resulting working nix expression is: (also see the provider config at the bottom)
let
mach-nix = import (builtins.fetchGit {
url = "https://github.com/DavHau/mach-nix/";
ref = "dev";
rev = "371c0ebf7d6629c6893bc140be541452b2bd3129";
});
in mach-nix.mkPython {
requirements = ''
affine==2.3.0
appdirs==1.4.4
#appnope==0.1.0; python_version >= "3.3" and sys_platform == "darwin" or platform_system == "Darwin"
arcgis==1.8.2
area==1.1.1
argon2-cffi==20.1.0
#atomicwrites==1.4.0; sys_platform == "win32"
attrs==19.3.0
autoflake==1.3.1
backcall==0.2.0
beautifulsoup4==4.9.1
black==19.10b0
bleach==3.1.5
bokeh==2.1.1
certifi==2020.6.20
cffi==1.14.1
chardet==3.0.4
click==7.1.2
click-plugins==1.1.1
cligj==0.5.0
#colorama==0.4.3; python_version >= "3.3" and sys_platform == "win32" or sys_platform == "win32"
colorcet==2.0.2
cryptography==3.0
cycler==0.10.0
dask[complete]==2.22.0
datashader==0.10.0
datashape==0.5.2
decorator==4.4.2
defusedxml==0.6.0
descartes==1.1.0
entrypoints==0.3
feather-format==0.4.1
fiona==1.8.13.post1
flake8==3.8.3
flufl.enum==4.1.1
geoalchemy2==0.8.4
geofeather==0.3.0
geographiclib==1.50
geojson==2.5.0
geojsonio==0.0.3
geolinks==0.2.0
geopandas==0.8.1
geopy==2.0.0
github3.py==1.3.0
googledrivedownloader==0.4
greedy==0.1.1
idna==2.10
imageio==2.9.0
importlib-metadata==1.7.0
ipykernel==5.3.4
ipython==7.17.0
ipython-genutils==0.2.0
ipywidgets==7.5.1
jedi==0.17.2
jeepney==0.4.3
jinja2==2.11.2
joblib==0.16.0
json5==0.9.5
jsonschema==3.2.0
jupyter-client==6.1.6
jupyter-core==4.6.3
jupyterlab==2.2.4
jupyterlab-server==1.2.0
jwcrypto==0.7
keyring==21.3.0
kiwisolver==1.2.0
lerc==0.1.0
libpysal==4.3.0
lidar==0.5.0
lxml==4.5.2
markupsafe==1.1.1
matplotlib==3.3.0
mccabe==0.6.1
mercantile==1.1.5
missingno==0.4.2
mistune==0.8.4
momepy==0.3.0
more-itertools==8.4.0
multipledispatch==0.6.0
munch==2.5.0
mypy==0.782
mypy-extensions==0.4.3
nbconvert==5.6.1
nbformat==5.0.7
networkx==2.4
notebook==6.1.1
ntlm-auth==1.5.0
numba==0.50.1
numpy==1.19.1
oauthlib==3.1.0
osm-diff-tool==1.1.0
osmapi==1.2.2
osmnet==0.1.6
osmpythontools
overpass==0.7
overpy2==0.4.2
owslib==0.20.0
packaging==20.4
pandas==1.1.0
pandocfilters==1.4.2
param==1.9.3
parso==0.7.1
pathlib==1.0.1
pathspec==0.8.0
pexpect==4.8.0
pickleshare==0.7.5
pillow==7.2.0
pluggy==0.13.1
pooch==1.1.1
prometheus-client==0.8.0
prompt-toolkit==3.0.5
ptyprocess==0.6.0
py==1.9.0
pyarrow==1.0.0
pycodestyle==2.6.0
#pycparser==2.20; platform_system == "Windows" and python_version != "3.3" or platform_system == "Windows" and python_version != "3.3" and sys_platform == "linux"
pycsw==2.4.2
pyct[cmd]==0.4.6
pydal==20200714.1
pyflakes==2.2.0
pygeos==0.7.1
pygis==0.1.3
pygments==2.6.1
#pykerberos==1.2.1; platform_system == "Windows" and sys_platform != "win32"
pyparsing==2.4.7
pyproj==2.6.1.post1
pyrsistent==0.16.0
pyshp==2.1.0
pysimplegui==4.28.0
pytest==5.4.3
python-dateutil==2.8.1
pytz==2020.1
pywavelets==1.1.1
#pywin32==228; sys_platform == "win32" or platform_system == "Windows"
#pywin32-ctypes==0.2.0; sys_platform == "win32"
#pywinpty==0.5.7; os_name == "nt"
pywps==4.2.7
pyyaml==5.3.1
pyzmq==19.0.2
rasterio[s3]==1.1.5
rasterstats==0.15.0
regex==2020.7.14
requests==2.24.0
#requests-kerberos==0.12.0; platform_system == "Windows"
requests-ntlm==1.1.0
requests-oauthlib==1.3.0
requests-toolbelt==0.9.1
richdem==0.3.4
rio-cogeo==1.1.10
rsgis==0.0.3
scikit-image==0.17.2
scikit-learn==0.23.2
scipy==1.5.2
seaborn==0.10.1
secretstorage==3.1.2
send2trash==1.5.0
shapely==1.7.0
simplejson==3.17.2
six==1.15.0
snuggs==1.4.7
soupsieve==1.9.6
spatial==0.2.0
sqlalchemy==1.3.18
supermercado==0.1.1
terminado==0.8.3
testpath==0.4.4
threadpoolctl==2.1.0
tifffile==2020.7.24
toml==0.10.1
toolz==0.10.0
tornado==6.0.4
tqdm==4.48.2
traitlets==4.3.3
typed-ast==1.4.1
typing-extensions==3.7.4.2
ujson==3.1.0
uritemplate==3.0.1
urllib3==1.25.10
verde==1.5.0
wcwidth==0.2.5
webencodings==0.5.1
werkzeug==1.0.1
widgetsnbextension==3.5.1
#winkerberos==0.7.0; platform_system == "Windows" and sys_platform == "win32" or platform_system == "Windows"
xarray==0.16.0
xarray-spatial==0.0.8
xmltodict==0.12.0
zipp==3.1.0
'';
providers = {
# Change the provider for osmpythontools to "nixpkgs", because the inherited patches from nixpkgs won't apply.
osmpythontools = "nixpkgs";
};
}
InLaw
error: