out_of_range error in substr

DavidsonGroup / flexiplex

The Flexible Demultiplexer

https://davidsongroup.github.io/flexiplex/

MIT License

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out_of_range error in substr #42

Closed ChangqingW closed 4 months ago

ChangqingW commented 7 months ago

UMI extraction is not trivial when considering its relative position to the BC and where the read starts / ends. Maybe it should be in a separate function.

ChangqingW commented 7 months ago

Done with the get_umi function, let's see if this fixes their out_of_range issue