<DEL:SVSIZE=0+:AGGREGATED>

DecodeGenetics / graphtyper

Population-scale genotyping using pangenome graphs

http://dx.doi.org/10.1038/ng.3964

MIT License

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Open anxuan-web opened 2 years ago

anxuan-web commented 2 years ago

Hi In my result, some DEL length is 0 bp, why is that? Can the SVs of length 0 bp be filtered out?

hannespetur commented 1 year ago

Hi, sorry for the late response. Can you share the input VCF?

changhan1110 commented 1 year ago

Hi, what was the conclusion of this thread? I have got many SVSIZE=0+ variants as well. What does it mean?