Deep-MI / FastSurfer

PyTorch implementation of FastSurferCNN
Apache License 2.0
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Support for lesion masks? #509

Closed wtmccuddy closed 5 months ago

wtmccuddy commented 5 months ago

Hello,

I saw in a previous post something about a "lesion-robust tool" and was wondering if, when, and how his can be used to improve segmentation and surface reconstruction. I have a lot of subjects with brain tumors (often GBMs) where segmentation results are good but often contain errors around the lesion. Is this something that's available now?

Thanks,

Travis

m-reuter commented 5 months ago

Hi Travis, we are indeed working on a lesion robust version that supports lesion masks. We are in the final stages of running experiments and finishing the paper. Usually we make the code public after paper acceptance and final testing. So this can still take months. Maybe we can share an early development version at some point for testing. Send an email.