Open Filco306 opened 8 months ago
Hi,
I am trying to run A*Net which uses your package. I am running into the following error when trying to compile functional.generalized_rspmm.
functional.generalized_rspmm
(astarnet) [AStarNet]$ python3 script/run.py -c config/transductive/fb15k237_astarnet.yaml --gpus [0] 12:22:42 Config file: config/transductive/fb15k237_astarnet.yaml 12:22:42 {'output_dir': '~/experiments/', 'dataset': {'class': 'FB15k237', 'path': '~/datasets/knowledge_graphs/'}, 'task': {'class': 'KnowledgeGraphCompletion', 'model': {'class': 'AStarNet', 'base_layer': {'class': 'NBFNetConv', 'input_dim': 32, 'output_dim': 32, 'query_input_dim': 32, 'message_func': 'distmult', 'aggregate_func': 'pna', 'layer_norm': True, 'dependent': True}, 'num_layer': 6, 'short_cut': True, 'remove_one_hop': True, 'node_ratio': 0.1}, 'criterion': 'bce', 'num_negative': 32, 'strict_negative': True, 'adversarial_temperature': 0.5, 'sample_weight': False, 'full_batch_eval': True}, 'optimizer': {'class': 'Adam', 'lr': 0.005}, 'engine': {'gpus': [0], 'batch_size': 64}, 'train': {'num_epoch': 20}, 'metric': 'mrr'} Loading ~/datasets/knowledge_graphs/fb15k237_train.txt: 100%|███████████████| 272115/272115 [00:00<00:00, 650901.52it/s] Loading ~/datasets/knowledge_graphs/fb15k237_valid.txt: 100%|█████████████████| 17535/17535 [00:00<00:00, 638147.35it/s] Loading ~/datasets/knowledge_graphs/fb15k237_test.txt: 100%|██████████████████| 20466/20466 [00:00<00:00, 645622.12it/s] 12:22:43 FB15k237( #entity: 14541 #relation: 237 #triplet: 310116 ) 12:22:43 #train: 272115, #valid: 17535, #test: 20466 Traceback (most recent call last): File "script/run.py", line 62, in <module> solver = util.build_solver(cfg, dataset) File "~/KGCBaselines/AStarNet/reasoning/util.py", line 107, in build_solver task = core.Configurable.load_config_dict(cfg.task) File "~/.conda/envs/astarnet/lib/python3.7/site-packages/torchdrug/core/core.py", line 269, in load_config_dict v = _Configurable.load_config_dict(v) File "~/.conda/envs/astarnet/lib/python3.7/site-packages/torchdrug/core/core.py", line 269, in load_config_dict v = _Configurable.load_config_dict(v) File "~/.conda/envs/astarnet/lib/python3.7/site-packages/torchdrug/core/core.py", line 277, in load_config_dict return cls(**new_config) File "~/.conda/envs/astarnet/lib/python3.7/site-packages/decorator.py", line 232, in fun return caller(func, *(extras + args), **kw) File "~/.conda/envs/astarnet/lib/python3.7/site-packages/torchdrug/core/core.py", line 296, in wrapper return init(self, *args, **kwargs) File "~/KGCBaselines/AStarNet/reasoning/layer.py", line 55, in __init__ functional.generalized_rspmm(adjacency, relation_input, input, sum="add", mul="mul") File "~/.conda/envs/astarnet/lib/python3.7/site-packages/torchdrug/layers/functional/spmm.py", line 378, in generalized_rspmm return Function.apply(sparse.coalesce(), relation, input) File "~/.conda/envs/astarnet/lib/python3.7/site-packages/torchdrug/layers/functional/spmm.py", line 174, in forward forward = spmm.rspmm_add_mul_forward_cpu File "~/.conda/envs/astarnet/lib/python3.7/site-packages/torchdrug/utils/torch.py", line 26, in __getattr__ return getattr(self.module, key) File "~/.conda/envs/astarnet/lib/python3.7/site-packages/torchdrug/utils/decorator.py", line 102, in __get__ result = self.func(obj) File "~/.conda/envs/astarnet/lib/python3.7/site-packages/torchdrug/utils/torch.py", line 32, in module self.verbose, **self.kwargs) File "~/.conda/envs/astarnet/lib/python3.7/site-packages/torch/utils/cpp_extension.py", line 1214, in load keep_intermediates=keep_intermediates) File "~/.conda/envs/astarnet/lib/python3.7/site-packages/torch/utils/cpp_extension.py", line 1435, in _jit_compile is_standalone=is_standalone) File "~/.conda/envs/astarnet/lib/python3.7/site-packages/torch/utils/cpp_extension.py", line 1511, in _write_ninja_file_and_build_library get_compiler_abi_compatibility_and_version(compiler) File "~/.conda/envs/astarnet/lib/python3.7/site-packages/torch/utils/cpp_extension.py", line 324, in get_compiler_abi_compatibility_and_version if not check_compiler_ok_for_platform(compiler): File "~/.conda/envs/astarnet/lib/python3.7/site-packages/torch/utils/cpp_extension.py", line 287, in check_compiler_ok_for_platform version_string = subprocess.check_output([compiler, '-v'], stderr=subprocess.STDOUT).decode(*SUBPROCESS_DECODE_ARGS) File "~/.conda/envs/astarnet/lib/python3.7/subprocess.py", line 411, in check_output **kwargs).stdout File "~/.conda/envs/astarnet/lib/python3.7/subprocess.py", line 512, in run output=stdout, stderr=stderr) subprocess.CalledProcessError: Command '['c++', '-v']' returned non-zero exit status 1.
Package versions:
Python 3.7.16 torchdrug 0.2.1 torch 1.2.1
I am trying to find the error, but I can't seem to find it. Appreciate any help here. Thank you!
Best Filip
Could you try to execute c++ --version and gcc --version in your terminal? Maybe upgrading / installing gcc drivers could do the trick.
c++ --version
gcc --version
Hi,
I am trying to run A*Net which uses your package. I am running into the following error when trying to compile
functional.generalized_rspmm
.Package versions:
I am trying to find the error, but I can't seem to find it. Appreciate any help here. Thank you!
Best Filip