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DeepTrial / Retina-VesselNet

A Simple U-net model for Retinal Blood Vessel Segmentation based on tensorflow2
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FileNotFoundError: [Errno 2] No such file or directory: './experiments/VesselNet/dataset/train/groundtruth/./emanual1.tif' #25

Closed llmir closed 5 years ago

llmir commented 5 years ago

This message comes up when running main_training.py

I don't understand where this error is coming from as I cannot find where we are actually looking for a file 'emanual1.tif'.

Did someone run in the same issue?

DeepTrial commented 5 years ago

i think this error is about the problem of image path. how do u organize the train image data?

llmir commented 5 years ago

thx, but i just copy your files in VesselNet and paste them at the same place. And i have saw the same issue closed sevaral months ago without a solution to this issue.

llmir commented 5 years ago

Traceback (most recent call last): File "main_train.py", line 54, in main_train() File "main_train.py", line 35, in main_train dataloader.prepare_dataset() File "/home/mir/Retina-VesselNet/experiments/data_loaders/standard_loader.py", line 72, in prepare_dataset imgs_train, groundTruth=self._access_dataset(self.train_img_path,self.train_groundtruth_path,self.train_type) File "/home/mir/Retina-VesselNet/experiments/data_loaders/standard_loader.py", line 60, in _access_dataset gtImg=plt.imread(gtPath,0) File "/home/mir/anaconda3/envs/tf2/lib/python3.6/site-packages/matplotlib/pyplot.py", line 2152, in imread return matplotlib.image.imread(fname, format) File "/home/mir/anaconda3/envs/tf2/lib/python3.6/site-packages/matplotlib/image.py", line 1351, in imread with Image.open(fname) as image: File "/home/mir/anaconda3/envs/tf2/lib/python3.6/site-packages/PIL/Image.py", line 2652, in open fp = builtins.open(filename, "rb") FileNotFoundError: [Errno 2] No such file or directory: './experiments/VesselNet/dataset/train/groundtruth/./emanual1.tif'

this is the whole Traceback.

DeepTrial commented 5 years ago

i‘ve noticed that you try to run the code in ubuntu, i setup up the model in win10, maybe the problem is the different type of file path like '/' and '\'.