Defense-Circuits-Lab / findmycells

An end-to-end bioimage analysis pipeline with state-of-the-art tools for non-coding experts
https://defense-circuits-lab.github.io/findmycells/
GNU General Public License v3.0
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cellpose update #51

Open KonKob opened 12 hours ago

KonKob commented 12 hours ago

As cellpose 3.0 was released recently, but it doesn't seem to integrate with findmycells easily, make sure, to use the cellpose 2.0.5 version. On Google Colab you can run the following command after !pip install findmycells: !pip install cellpose==2.0.5

To fully fix this issue, the cellpose version would have to be specified in a new pypi release.