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DepledgeLab / DRUMMER

DRUMMER: Detection of RNA modifications in nanopore direct RNA Sequencing datasets
GNU General Public License v3.0
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Regarding drummer.sh command #4

Closed aman21392 closed 3 years ago

aman21392 commented 3 years ago

minimap2 -t 70 -ax map-ont -p 0.99 Homo_sapiens.GRCh38.cdna_all.ncrna.fa combined_T.fastq > E6.sam samtools view -h E6.sam | awk ' ( $5 > 0 || $1 ~ /SQ/ ) ' | awk ' ( $2 == 0 || $1 ~ /SQ/ ) ' | awk ' ( $6 !~ /H/ || $1 ~ /SQ/ ) ' | samtools view -b - > E6.bam samtools sort E6.bam -o E6.sort.bam samtools index E6.sort.bam minimap2 -ax splice -t 70 -k14 -uf --secondary=no Homo_sapiens.GRCh38.dna.toplevel.fa Homo_sapiens.GRCh38.cdna_all.ncrna.fa --split-prefix STR | samtools view -@70 -b -F 2304 - | samtools sort -@ 70 -o transcript.bam samtools index transcript.sort.bam bamToBed -bed12 -i transcript.sort.bam > transcript.sort.bed cut -f4,6,7,10,11,12 transcript.sort.bed > transcripts.txt then finally run drummer.sh command-- /home/aclab/apps/DRUMMER/drummer.sh -r Homo_sapiens.GRCh38.cdna_all.ncrna.fa -u transcripts.txt -c E6_wt.sort.bam -t E6_kn.sort.bam -o ./drummer_wild_vs_kn/ -m isoform

-r [flag] is set -t [flag] is set -c [flag] is set -o [flag] is set using default value of 1.5 for Odds Ratio Test using default value of 0.05 for padj cutoff m6A status default to True using default value of 0.1 for fraction difference Visualization status default to True -m set to isoform /home/aclab/apps/DRUMMER/core Homo_sapiens.GRCh38.cdna_all.ncrna.fa transcripts.txt E6_kn.sort.bam E6_wild.sort.bam /Drive8/E6/drummer_wild_vs_kn/ Directory /path/to/dir exists. awk: cmd. line:1: (FILENAME=- FNR=9) fatal: can't redirect to /Drive8/E6/drummer_wild_vs_kn//transcripts/ENST00000631435.1 cdna chromosome:GRCh38:CH R_HSCHR7_2_CTG6:142847306:142847317:1 gene:ENSG00000282253.1 gene_biotype:TR_D_gene transcript_biotype:TR_D_gene gene_symbol:TRBD1 description:T cell receptor bet a diversity 1 [Source:HGNC Symbol;Acc:HGNC:12158].fa' (File name too long) ENST00000456328.2 awk: fatal: cannot open file/Drive8/E6/drummer_wild_vs_kn//transcripts/ENST00000456328.2.fa' for reading (No such file or directory) Minimum mapping quality is set to 0 [fai_load] build FASTA index. open: No such file or directory [_razf_open] fail to open /Drive8/E6/drummer_wild_vs_kn//transcripts/ENST00000456328.2.fa [fai_build] fail to open the FASTA file /Drive8/E6/drummer_wild_vs_kn//transcripts/ENST00000456328.2.fa [fai_load] fail to open FASTA index. Minimum mapping quality is set to 0 [fai_load] build FASTA index. open: No such file or directory [_razf_open] fail to open /Drive8/E6/drummer_wild_vs_kn//transcripts/ENST00000456328.2.fa [fai_build] fail to open the FASTA file /Drive8/E6/drummer_wild_vs_kn//transcripts/ENST00000456328.2.fa [fai_load] fail to open FASTA index. Traceback (most recent call last): File "/home/aclab/apps/DRUMMER/core/../modules/readcount_filter.py", line 94, in filtered_df = pd.concat(list_of_rows).reset_index(drop=True) File "/home/aclab/.local/lib/python3.6/site-packages/pandas/core/reshape/concat.py", line 281, in concat sort=sort, File "/home/aclab/.local/lib/python3.6/site-packages/pandas/core/reshape/concat.py", line 329, in init raise ValueError("No objects to concatenate") ValueError: No objects to concatenate Traceback (most recent call last): File "/home/aclab/apps/DRUMMER/core/../modules/odds_ratio.py", line 86, in df = pd.read_csv(input,sep='\t') File "/home/aclab/.local/lib/python3.6/site-packages/pandas/io/parsers.py", line 676, in parser_f return _read(filepath_or_buffer, kwds)

I just want to know is it i wrong somewhere because the bam readcount folder is created in that all are 0kb in size. and so i just think is not correct to run the pipeline. So can you help me out to this issue Thanks in advance

DepledgeLab commented 3 years ago

The problem would seem to be that the individual transcript files being generated have filenames that are too long

_awk: cmd. line:1: (FILENAME=- FNR=9) fatal: can't redirect to /Drive8/E6/drummer_wild_vs_kn//transcripts/ENST00000631435.1 cdna chromosome:GRCh38:CH R_HSCHR7_2_CTG6:142847306:142847317:1 gene:ENSG00000282253.1 gene_biotype:TR_D_gene transcript_biotype:TR_D_gene genesymbol:TRBD1 description:T cell receptor bet a diversity 1 [Source:HGNC Symbol;Acc:HGNC:12158].fa' (File name too long) ENST00000456328.2 awk: fatal: cannot open file

Quickest solution will be to edit your input transcriptome file to shorten the names on the header lines

aman21392 commented 3 years ago

Hi, It give output of individual transcript.txt file and i go through in that file. I just want to know that which position i could say it is m6A modified can you please tell me. I shared one of those file below so please just tell me how i can consider it for m6A modification. Thanks in advance

chr_mod pos_mod ref_mod depth_mod A_mod C_mod G_mod T_mod N_mod ref_fraction_mod chr_unmod ref_unmod depth_unmod A_unmod C_unmod G_unmod T_unmod N_unmod ref_fraction_unmod ratio_unmod ratio_mod fold_change log2_fc odds_ratio p_values_OR p_values_OR_adj five_bp_motif eleven_bp_motif G_test p_val padj candidate_site homopolymer genomic_position ENST00000321358.12 24 C 2 0 2 0 0 0 1.0 ENST00000321358.12 C 41 0 40 0 0 1 0.975609756097561 40.0 1.0 40.0 5.321928094887364 0.0 1.0 1511.0 NNCGG NNNNNCGGCGG 0 0.998883797824045 1 42682442 ENST00000321358.12 25 G 2 1 0 1 0 0 0.5 ENST00000321358.12 G 43 2 0 41 0 0 0.9534883720930232 20.5 1.0 20.5 4.357552004618084 20.5 0.13030303030302995 196.88787878787826 NCGGC NNNNCGGCGGG 3 0.5421431614372554 1 True 42682443 ENST00000321358.12 27 G 2 0 0 2 0 0 1.0 ENST00000321358.12 G 49 0 0 48 0 1 0.979591836734694 48.0 1.0 48.0 5.584962500721158 0.0 1.0 1511.0 CGGCG NNNCGGCGGGG 0 0.9992101646623548 1 True 42682445 ENST00000321358.12 30 C 2 0 2 0 0 0 1.0 ENST00000321358.12 C 52 0 51 0 0 1 0.9807692307692308 51.0 1.0 51.0 5.672425341971495 0.0 1.0 1511.0 GGCGG NNCGGCGGGGC 0 0.9992962633895456 1 True 42682448 ENST00000321358.12 31 G 2 0 0 2 0 0 1.0 ENST00000321358.12 G 51 8 0 43 0 0 0.8431372549019608 5.375 1.0 5.375 2.426264754702098 0.0 1.0 1511.0 GCGGG NCGGCGGGGCG 1 0.9552553014060301 1 True 42682449 ENST00000321358.12 32 G 2 0 0 2 0 0 1.0 ENST00000321358.12 G 50 0 0 49 1 0 0.98 49.0 1.0 49.0 5.614709844115208 0.0 1.0 1511.0 CGGGG CGGCGGGGCGA 0 0.9992405547330324 1 True 42682450 ENST00000321358.12 34 G 2 0 0 2 0 0 1.0 ENST00000321358.12 G 60 1 0 52 0 7 0.8666666666666667 6.5 1.0 6.5 2.700439718141092 0.0 1.0 1511.0 GGGGC GGCGGGGCGAC 1 0.9673906638416159 1 True 42682452 ENST00000321358.12 36 G 2 0 0 2 0 0 1.0 ENST00000321358.12 G 54 1 0 53 0 0 0.9814814814814816 53.0 1.0 53.0 5.7279204545632005 0.0 1.0 1511.0 GGGCG GCGGGGCGACC 0 0.9993460149448942 1 True 42682454 ENST00000321358.12 37 C 2 0 2 0 0 0 1.0 ENST00000321358.12 C 54 0 53 0 1 0 0.9814814814814816 53.0 1.0 53.0 5.7279204545632005 0.0 1.0 1511.0 GGCGA CGGGGCGACCC 0 0.9993460149448944 1 True 42682455 ENST00000321358.12 38 G 2 0 0 2 0 0 1.0 ENST00000321358.12 G 55 4 0 51 0 0 0.9272727272727272 12.75 1.0 12.75 3.672425341971497 0.0 1.0 1511.0 GCGAC GGGGCGACCCA 0 0.990069896645062 1 True 42682456 ENST00000321358.12 40 A 3 2 0 0 0 1 0.6666666666666666 ENST00000321358.12 A 56 52 2 0 0 2 0.9285714285714286 13.0 2.0 6.5 2.700439718141092 6.5 0.2370112891814569 358.1240579531813 CGACC GGGCGACCCAG 3 0.5935598307915053 1 True 42682458 ENST00000321358.12 41 C 2 0 2 0 0 0 1.0 ENST00000321358.12 C 42 1 39 0 2 0 0.9285714285714286 13.0 1.0 13.0 3.700439718141092 0.0 1.0 1511.0 GACCC GGCGACCCAGG 0 0.9906345497869526 1 True 42682459 ENST00000321358.12 43 C 2 0 2 0 0 0 1.0 ENST00000321358.12 C 57 0 56 0 0 1 0.9824561403508772 56.0 1.0 56.0 5.807354922057604 0.0 1.0 1511.0 ACCCA GCGACCCAGGC 0 0.9994112290170601 1 True 42682461 ENST00000321358.12 44 C 2 0 2 0 0 0 1.0 ENST00000321358.12 C 56 0 53 1 0 2 0.9464285714285714 17.666666666666668 1.0 17.666666666666668 4.142957953842043 0.0 1.0 1511.0 CCCAG CGACCCAGGCT 0 0.9946572036996066 1 True 42682462 ENST00000321358.12 45 A 2 1 0 1 0 0 0.5 ENST00000321358.12 A 50 48 0 2 0 0 0.96 24.0 1.0 24.0 4.584962500721156 24.0 0.11312217194570168 170.92760180995526 CCAGG GACCCAGGCTG 3 0.4973830836239761 1 True 42682463 ENST00000321358.12 46 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 52 0 1 51 0 0 0.9807692307692308 51.0 1.0 51.0 5.672425341971495 0.0 1.0 1511.0 CAGGC ACCCAGGCTGA 0 0.9984699976670152 1 True 42682464 ENST00000321358.12 50 G 2 0 0 2 0 0 1.0 ENST00000321358.12 G 58 0 0 57 0 1 0.9827586206896552 57.0 1.0 57.0 5.832890014164741 0.0 1.0 1511.0 AGGCT CCCAGGCTGAC 0 0.9994307914455932 1 True 42682468 ENST00000321358.12 53 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 59 0 55 0 2 2 0.9322033898305084 13.75 1.0 13.75 3.78135971352466 0.0 1.0 1511.0 GGCTG CCAGGCTGACG 0 0.9818139331395372 1 42682471 ENST00000321358.12 54 T 3 0 0 0 3 0 1.0 ENST00000321358.12 T 56 6 0 2 48 0 0.8571428571428571 6.0 1.0 6.0 2.584962500721156 0.0 1.0 1511.0 GCTGA CAGGCTGACGC 1 0.9250796136745736 1 42682472 ENST00000321358.12 55 G 5 0 0 3 0 2 0.6 ENST00000321358.12 G 63 2 0 53 0 8 0.8412698412698413 5.3 1.5 3.533333333333333 1.8210298589546805 3.533333333333333 0.2107449179442161 318.4355710137105 CTGAC AGGCTGACGCC 2 0.6775423104633196 1 42682473 ENST00000321358.12 56 A 3 3 0 0 0 0 1.0 ENST00000321358.12 A 54 53 0 1 0 0 0.9814814814814816 53.0 1.0 53.0 5.7279204545632005 0.0 1.0 1511.0 TGACG GGCTGACGCCA 0 0.9985771495944348 1 42682474 ENST00000321358.12 58 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 58 0 57 0 0 1 0.9827586206896552 57.0 1.0 57.0 5.832890014164741 0.0 1.0 1511.0 GACGC GCTGACGCCAC 0 0.9987601404880172 1 42682476 ENST00000321358.12 60 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 59 0 0 57 0 2 0.9661016949152542 28.5 1.0 28.5 4.832890014164741 0.0 1.0 1511.0 ACGCC CTGACGCCACG 0 0.9952675199127204 1 42682478 ENST00000321358.12 62 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 56 1 55 0 0 0 0.9821428571428572 55.0 1.0 55.0 5.78135971352466 0.0 1.0 1511.0 CGCCA TGACGCCACGC 0 0.9986733859954642 1 42682480 ENST00000321358.12 63 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 48 0 47 1 0 0 0.9791666666666666 47.0 1.0 47.0 5.554588851677637 0.0 1.0 1511.0 GCCAC GACGCCACGCC 0 0.9982157364222825 1 42682481 ENST00000321358.12 65 A 2 1 0 1 0 0 0.5 ENST00000321358.12 A 41 33 0 1 7 0 0.8048780487804879 4.125 1.0 4.125 2.0443941193584534 4.125 0.3787375415282401 572.2724252491707 CCACG ACGCCACGCCC 4 0.3568942859551469 1 True 42682483 ENST00000321358.12 66 C 2 0 2 0 0 0 1.0 ENST00000321358.12 C 54 0 50 0 4 0 0.925925925925926 12.5 1.0 12.5 3.643856189774725 0.0 1.0 1511.0 CACGC CGCCACGCCCG 0 0.9897104886656912 1 True 42682484 ENST00000321358.12 68 G 2 1 0 1 0 0 0.5 ENST00000321358.12 G 55 1 1 53 0 0 0.9636363636363636 26.5 1.0 26.5 4.7279204545632005 26.5 0.10338345864661627 156.21240601503715 ACGCC GCCACGCCCGC 5 0.331302925726732 1 True 42682486 ENST00000321358.12 69 C 3 0 1 0 2 0 0.3333333333333333 ENST00000321358.12 C 56 0 53 0 3 0 0.9464285714285714 17.666666666666668 2.0 8.833333333333334 3.1429579538420427 8.833333333333334 0.19299270971115706 291.6119843735583 CGCCC CCACGCCCGCG 7 0.13431701408014807 1 True 42682487 ENST00000321358.12 72 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 58 0 55 0 3 0 0.9482758620689656 18.33333333333333 1.0 18.33333333333333 4.196397212803503 0.0 1.0 1511.0 GCCCG CACGCCCGCGG 0 0.9891708233609858 1 True 42682490 ENST00000321358.12 73 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 57 0 56 0 1 0 0.9824561403508772 56.0 1.0 56.0 5.807354922057604 0.0 1.0 1511.0 CCCGC ACGCCCGCGGC 0 0.9987178683200988 1 True 42682491 ENST00000321358.12 74 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 58 1 0 56 0 1 0.9655172413793104 28.0 1.0 28.0 4.807354922057604 0.0 1.0 1511.0 CCGCG CGCCCGCGGCC 0 0.9951852321605764 1 True 42682492 ENST00000321358.12 76 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 57 1 54 0 1 1 0.9473684210526316 18.0 1.0 18.0 4.169925001442312 0.0 1.0 1511.0 CGCGG GCCCGCGGCCT 0 0.9890305124080184 1 True 42682494 ENST00000321358.12 77 G 2 0 0 2 0 0 1.0 ENST00000321358.12 G 59 3 1 52 1 2 0.8813559322033898 7.428571428571429 1.0 7.428571428571429 2.8930847960834885 0.0 1.0 1511.0 GCGGC CCCGCGGCCTA 0 0.9744220500812142 1 True 42682495 ENST00000321358.12 78 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 57 1 2 54 0 0 0.9473684210526316 18.0 1.0 18.0 4.169925001442312 0.0 1.0 1511.0 CGGCC CCGCGGCCTAG 0 0.9889210823744072 1 42682496 ENST00000321358.12 79 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 59 0 57 0 1 1 0.9661016949152542 28.5 1.0 28.5 4.832890014164741 0.0 1.0 1511.0 GGCCT CGCGGCCTAGT 0 0.9953416621592712 1 42682497 ENST00000321358.12 80 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 62 1 57 0 0 4 0.9193548387096774 11.4 1.0 11.4 3.51096191927738 0.0 1.0 1511.0 GCCTA GCGGCCTAGTT 0 0.9744918869061726 1 42682498 ENST00000321358.12 81 T 4 0 0 0 3 1 0.75 ENST00000321358.12 T 57 2 2 0 52 1 0.912280701754386 10.4 3.0 3.466666666666667 1.7935491225325737 3.466666666666667 0.3464563911431345 523.4956070172761 CCTAG CGGCCTAGTTA 3 0.4828826912513455 1 42682499 ENST00000321358.12 82 A 3 2 0 1 0 0 0.6666666666666666 ENST00000321358.12 A 53 42 0 11 0 0 0.7924528301886793 3.8181818181818175 2.0 1.9090909090909087 0.932885804141463 1.9090909090909087 0.5222222222222215 789.0777777777766 CTAGT GGCCTAGTTAC 0 0.9932539634870532 1 42682500 ENST00000321358.12 83 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 60 2 0 56 0 2 0.9333333333333332 14.0 1.0 14.0 3.807354922057604 0.0 1.0 1511.0 TAGTT GCCTAGTTACC 0 0.982383609482808 1 42682501 ENST00000321358.12 84 T 3 0 0 0 3 0 1.0 ENST00000321358.12 T 57 0 1 0 56 0 0.9824561403508772 56.0 1.0 56.0 5.807354922057604 0.0 1.0 1511.0 AGTTA CCTAGTTACCA 0 0.9987178683200988 1 42682502 ENST00000321358.12 85 T 3 0 0 0 3 0 1.0 ENST00000321358.12 T 57 0 1 0 56 0 0.9824561403508772 56.0 1.0 56.0 5.807354922057604 0.0 1.0 1511.0 GTTAC CTAGTTACCAT 0 0.9987178683200988 1 42682503 ENST00000321358.12 86 A 2 2 0 0 0 0 1.0 ENST00000321358.12 A 53 51 1 0 1 0 0.9622641509433962 25.5 1.0 25.5 4.672425341971495 0.0 1.0 1511.0 TTACC TAGTTACCATC 0 0.9973587006795888 1 42682504 ENST00000321358.12 87 C 2 0 2 0 0 0 1.0 ENST00000321358.12 C 51 0 49 0 2 0 0.9607843137254902 24.5 1.0 24.5 4.614709844115208 0.0 1.0 1511.0 TACCA AGTTACCATCA 0 0.997092313980818 1 42682505 ENST00000321358.12 88 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 58 1 53 0 2 2 0.913793103448276 10.6 1.0 10.6 3.405992359675837 0.0 1.0 1511.0 ACCAT GTTACCATCAC 1 0.9712724738393624 1 42682506 ENST00000321358.12 89 A 3 2 0 0 1 0 0.6666666666666666 ENST00000321358.12 A 53 52 0 0 1 0 0.981132075471698 52.0 2.0 26.0 4.700439718141092 26.0 0.10519480519480504 158.94935064935044 CCATC TTACCATCACA 4 0.4753285039207876 1 42682507 ENST00000321358.12 90 T 4 0 0 0 3 1 0.75 ENST00000321358.12 T 56 2 3 0 50 1 0.8928571428571429 8.333333333333334 3.0 2.7777777777777786 1.4739311883324124 2.7777777777777777 0.39949962574466574 603.6439345001901 CATCA TACCATCACAC 4 0.4689694403472053 1 42682508 ENST00000321358.12 91 C 2 0 2 0 0 0 1.0 ENST00000321358.12 C 50 0 46 0 4 0 0.92 11.5 1.0 11.5 3.523561956057013 0.0 1.0 1511.0 ATCAC ACCATCACACC 0 0.9880581749116536 1 42682509 ENST00000321358.12 92 A 1 1 0 0 0 0 1.0 ENST00000321358.12 A 54 44 1 0 5 4 0.8148148148148148 4.4 1.0 4.4 2.137503523749935 0.0 1.0 1511.0 TCACA CCATCACACCC 0 0.9823420989170658 1 True 42682510 ENST00000321358.12 93 C 1 0 1 0 0 0 1.0 ENST00000321358.12 C 47 0 44 0 3 0 0.9361702127659576 14.666666666666664 1.0 14.666666666666664 3.8744691179161412 0.0 1.0 1511.0 CACAC CATCACACCCG 0 0.9979615307339844 1 True 42682511 ENST00000321358.12 94 A 1 1 0 0 0 0 1.0 ENST00000321358.12 A 53 42 0 0 11 0 0.7924528301886793 3.8181818181818175 1.0 3.8181818181818175 1.9328858041414632 0.0 1.0 1511.0 ACACC ATCACACCCGG 0 0.9772561339225024 1 True 42682512 ENST00000321358.12 95 C 3 0 2 0 1 0 0.6666666666666666 ENST00000321358.12 C 44 1 38 0 5 0 0.8636363636363636 6.333333333333332 2.0 3.1666666666666665 1.6629650127224291 3.1666666666666665 0.390687634905952 590.3290163428934 CACCC TCACACCCGGA 1 0.9060370655637016 1 True 42682513 ENST00000321358.12 96 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 59 1 56 0 1 1 0.9491525423728814 18.666666666666668 1.0 18.666666666666668 4.2223924213364485 0.0 1.0 1511.0 ACCCG CACACCCGGAG 0 0.9897336275696924 1 True 42682514 ENST00000321358.12 98 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 54 1 52 0 1 0 0.9629629629629628 26.0 1.0 26.0 4.700439718141092 0.0 1.0 1511.0 CCCGG ACACCCGGAGG 0 0.9944739197437582 1 True 42682516 ENST00000321358.12 99 G 2 0 0 2 0 0 1.0 ENST00000321358.12 G 48 4 3 40 1 0 0.8333333333333334 5.0 1.0 5.0 2.3219280948873617 0.0 1.0 1511.0 CCGGA CACCCGGAGGC 1 0.9502399530749006 1 True 42682517 ENST00000321358.12 101 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 59 1 0 58 0 0 0.9830508474576272 58.0 1.0 58.0 5.857980995127572 0.0 1.0 1511.0 CGGAG ACCCGGAGGCG 0 0.9988003465156988 1 True 42682519 ENST00000321358.12 102 A 3 3 0 0 0 0 1.0 ENST00000321358.12 A 60 59 0 0 0 1 0.9833333333333332 59.0 1.0 59.0 5.8826430493618425 0.0 1.0 1511.0 GGAGG CCCGGAGGCGC 0 0.9988386188802278 1 True 42682520 ENST00000321358.12 103 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 58 2 0 56 0 0 0.9655172413793104 28.0 1.0 28.0 4.807354922057604 0.0 1.0 1511.0 GAGGC CCGGAGGCGCA 0 0.9951099395222944 1 42682521 ENST00000321358.12 104 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 62 1 0 59 0 2 0.9516129032258064 19.666666666666668 1.0 19.666666666666668 4.2976805486406855 0.0 1.0 1511.0 AGGCG CGGAGGCGCAG 0 0.9905669691682832 1 42682522 ENST00000321358.12 108 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 58 0 57 0 1 0 0.9827586206896552 57.0 1.0 57.0 5.832890014164741 0.0 1.0 1511.0 GGCGC GGAGGCGCAGC 0 0.9987601404880172 1 42682526 ENST00000321358.12 109 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 58 0 0 57 0 1 0.9827586206896552 57.0 1.0 57.0 5.832890014164741 0.0 1.0 1511.0 GCGCA GAGGCGCAGCT 0 0.9987601404880172 1 42682527 ENST00000321358.12 110 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 58 2 53 0 3 0 0.913793103448276 10.6 1.0 10.6 3.405992359675837 0.0 1.0 1511.0 CGCAG AGGCGCAGCTG 1 0.971101880779897 1 42682528 ENST00000321358.12 111 A 3 2 0 0 1 0 0.6666666666666666 ENST00000321358.12 A 58 49 1 6 2 0 0.8448275862068966 5.4444444444444455 2.0 2.7222222222222223 1.4447848426728962 2.7222222222222223 0.4213670464017774 636.6856071130858 GCAGC GGCGCAGCTGC 3 0.5206896072327813 1 42682529 ENST00000321358.12 112 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 60 2 0 55 1 2 0.9166666666666666 11.0 1.0 11.0 3.4594316186372973 0.0 1.0 1511.0 CAGCT GCGCAGCTGCC 1 0.9730463529726372 1 42682530 ENST00000321358.12 113 C 3 0 2 0 1 0 0.6666666666666666 ENST00000321358.12 C 59 3 50 0 6 0 0.8474576271186439 5.5555555555555545 2.0 2.7777777777777777 1.4739311883324122 2.7777777777777777 0.4156530936012688 628.0518244315173 AGCTG CGCAGCTGCCG 1 0.8568625647715906 1 42682531 ENST00000321358.12 114 T 3 0 0 0 3 0 1.0 ENST00000321358.12 T 61 2 0 0 58 1 0.9508196721311476 19.33333333333333 1.0 19.33333333333333 4.273018494406416 0.0 1.0 1511.0 GCTGC GCAGCTGCCGC 0 0.9902684403498122 1 42682532 ENST00000321358.12 115 G 2 0 0 2 0 0 1.0 ENST00000321358.12 G 58 1 0 57 0 0 0.9827586206896552 57.0 1.0 57.0 5.832890014164741 0.0 1.0 1511.0 CTGCC CAGCTGCCGCA 0 0.9994307914455932 1 42682533 ENST00000321358.12 116 C 2 0 2 0 0 0 1.0 ENST00000321358.12 C 59 0 58 0 0 1 0.9830508474576272 58.0 1.0 58.0 5.857980995127572 0.0 1.0 1511.0 TGCCG AGCTGCCGCAG 0 0.999449385449215 1 42682534 ENST00000321358.12 117 C 2 0 2 0 0 0 1.0 ENST00000321358.12 C 55 0 54 0 1 0 0.9818181818181818 54.0 1.0 54.0 5.754887502163467 0.0 1.0 1511.0 GCCGC GCTGCCGCAGC 0 0.999368918821296 1 42682535 ENST00000321358.12 118 G 1 0 0 1 0 0 1.0 ENST00000321358.12 G 52 2 0 50 0 0 0.9615384615384616 25.0 1.0 25.0 4.643856189774724 0.0 1.0 1511.0 CCGCA CTGCCGCAGCG 0 0.9992616636642536 1 42682536 ENST00000321358.12 119 C 1 0 1 0 0 0 1.0 ENST00000321358.12 C 57 0 54 0 3 0 0.9473684210526316 18.0 1.0 18.0 4.169925001442312 0.0 1.0 1511.0 CGCAG TGCCGCAGCGG 0 0.9986103659953748 1 42682537 ENST00000321358.12 120 A 1 1 0 0 0 0 1.0 ENST00000321358.12 A 58 51 2 3 1 1 0.8793103448275862 7.2857142857142865 1.0 7.2857142857142865 2.8650704199138914 0.0 1.0 1511.0 GCAGC GCCGCAGCGGC 0 0.9928292896788966 1 42682538 ENST00000321358.12 121 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 63 1 0 61 0 1 0.9682539682539684 30.5 1.0 30.5 4.930737337562887 0.0 1.0 1511.0 CAGCG CCGCAGCGGCA 0 0.9958971340297844 1 42682539 ENST00000321358.12 122 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 62 1 61 0 0 0 0.9838709677419356 61.0 1.0 61.0 5.930737337562888 0.0 1.0 1511.0 AGCGG CGCAGCGGCAG 0 0.9989098412635008 1 42682540 ENST00000321358.12 124 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 62 4 0 58 0 0 0.935483870967742 14.5 1.0 14.5 3.857980995127572 0.0 1.0 1511.0 GCGGC GCAGCGGCAGA 0 0.9833037026493552 1 42682542 ENST00000321358.12 125 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 62 0 0 61 0 1 0.9838709677419356 61.0 1.0 61.0 5.930737337562888 0.0 1.0 1511.0 CGGCA CAGCGGCAGAC 0 0.9989098412635008 1 42682543 ENST00000321358.12 129 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 64 1 61 0 0 2 0.953125 20.33333333333333 1.0 20.33333333333333 4.34577483684173 0.0 1.0 1511.0 GGCAG AGCGGCAGACC 0 0.9911243609117919 1 42682547 ENST00000321358.12 130 A 3 2 0 1 0 0 0.6666666666666666 ENST00000321358.12 A 62 54 0 8 0 0 0.8709677419354839 6.75 2.0 3.375 1.7548875021634684 3.375 0.3653846153846171 552.0961538461564 GCAGA GCGGCAGACCA 1 0.9411686829582756 1 42682548 ENST00000321358.12 131 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 65 0 0 62 0 3 0.953846153846154 20.666666666666668 1.0 20.666666666666668 4.369233809665719 0.0 1.0 1511.0 CAGAC CGGCAGACCAT 0 0.9912831454381906 1 42682549 ENST00000321358.12 134 A 3 2 0 0 1 0 0.6666666666666666 ENST00000321358.12 A 52 48 1 0 3 0 0.9230769230769232 12.0 2.0 6.0 2.584962500721156 6.0 0.2529064227177437 382.1416047265109 AGACC GGCAGACCATC 2 0.7372846529734964 1 42682552 ENST00000321358.12 135 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 58 0 57 0 1 0 0.9827586206896552 57.0 1.0 57.0 5.832890014164741 0.0 1.0 1511.0 GACCA GCAGACCATCA 0 0.9987601404880172 1 42682553 ENST00000321358.12 136 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 61 1 60 0 0 0 0.9836065573770492 60.0 1.0 60.0 5.906890595608518 0.0 1.0 1511.0 ACCAT CAGACCATCAC 0 0.9988750796111184 1 42682554 ENST00000321358.12 137 A 3 3 0 0 0 0 1.0 ENST00000321358.12 A 62 61 0 0 0 1 0.9838709677419356 61.0 1.0 61.0 5.930737337562888 0.0 1.0 1511.0 CCATC AGACCATCACC 0 0.9989098412635008 1 42682555 ENST00000321358.12 138 T 3 0 0 0 3 0 1.0 ENST00000321358.12 T 62 0 4 0 55 3 0.8870967741935484 7.857142857142858 1.0 7.857142857142858 2.974004791467056 0.0 1.0 1511.0 CATCA GACCATCACCG 1 0.9515400840095068 1 42682556 ENST00000321358.12 139 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 52 1 50 0 1 0 0.9615384615384616 25.0 1.0 25.0 4.643856189774724 0.0 1.0 1511.0 ATCAC ACCATCACCGC 0 0.9940578967222664 1 42682557 ENST00000321358.12 140 A 3 3 0 0 0 0 1.0 ENST00000321358.12 A 52 47 3 0 2 0 0.903846153846154 9.4 1.0 9.4 3.232660756790275 0.0 1.0 1511.0 TCACC CCATCACCGCA 1 0.9645814859212116 1 42682558 ENST00000321358.12 141 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 67 0 56 0 6 5 0.8358208955223879 5.090909090909091 1.0 5.090909090909091 2.347923303420307 0.0 1.0 1511.0 CACCG CATCACCGCAA 1 0.9024769801865016 1 42682559 ENST00000321358.12 142 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 63 0 61 0 1 1 0.9682539682539684 30.5 1.0 30.5 4.930737337562887 0.0 1.0 1511.0 ACCGC ATCACCGCAAC 0 0.9958971340297844 1 42682560 ENST00000321358.12 143 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 64 0 0 61 1 2 0.953125 20.33333333333333 1.0 20.33333333333333 4.34577483684173 0.0 1.0 1511.0 CCGCA TCACCGCAACC 0 0.9911243609117919 1 42682561 ENST00000321358.12 144 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 62 0 60 0 2 0 0.967741935483871 30.0 1.0 30.0 4.906890595608519 0.0 1.0 1511.0 CGCAA CACCGCAACCA 0 0.9956970457351344 1 42682562 ENST00000321358.12 145 A 3 3 0 0 0 0 1.0 ENST00000321358.12 A 58 56 0 0 2 0 0.9655172413793104 28.0 1.0 28.0 4.807354922057604 0.0 1.0 1511.0 GCAAC ACCGCAACCAT 0 0.9951099395222948 1 42682563 ENST00000321358.12 146 A 3 3 0 0 0 0 1.0 ENST00000321358.12 A 62 52 1 0 9 0 0.8387096774193549 5.2 1.0 5.2 2.37851162325373 0.0 1.0 1511.0 CAACC CCGCAACCATG 1 0.9058621726520998 1 42682564 ENST00000321358.12 147 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 58 1 52 0 5 0 0.8965517241379308 8.666666666666666 1.0 8.666666666666666 3.115477217419936 0.0 1.0 1511.0 AACCA CGCAACCATGA 1 0.9590512600933028 1 42682565 ENST00000321358.12 148 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 63 0 62 0 0 1 0.984126984126984 62.0 1.0 62.0 5.954196310386875 0.0 1.0 1511.0 ACCAT GCAACCATGAG 0 0.9989430077871746 1 42682566 ENST00000321358.12 149 A 3 3 0 0 0 0 1.0 ENST00000321358.12 A 50 44 1 5 0 0 0.88 7.333333333333332 1.0 7.333333333333332 2.8744691179161412 0.0 1.0 1511.0 CCATG CAACCATGAGC 1 0.9462017787254512 1 42682567 ENST00000321358.12 150 T 3 0 0 0 3 0 1.0 ENST00000321358.12 T 46 1 3 0 42 0 0.9130434782608696 10.5 1.0 10.5 3.39231742277876 0.0 1.0 1511.0 CATGA AACCATGAGCA 1 0.9709810389378644 1 42682568 ENST00000321358.12 151 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 62 0 0 61 0 1 0.9838709677419356 61.0 1.0 61.0 5.930737337562888 0.0 1.0 1511.0 ATGAG ACCATGAGCAG 0 0.9989098412635008 1 42682569 ENST00000321358.12 152 A 4 3 0 0 0 1 0.75 ENST00000321358.12 A 62 61 0 1 0 0 0.9838709677419356 61.0 3.0 20.33333333333333 4.34577483684173 20.33333333333333 0.11841491841491825 178.92494172494145 TGAGC CCATGAGCAGC 6 0.20232668578771576 1 42682570 ENST00000321358.12 153 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 66 1 0 65 0 0 0.9848484848484848 65.0 1.0 65.0 6.0223678130284535 0.0 1.0 1511.0 GAGCA CATGAGCAGCG 0 0.9990338627751087 1 42682571 ENST00000321358.12 154 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 67 0 65 0 1 1 0.9701492537313432 32.5 1.0 32.5 5.022367813028454 0.0 1.0 1511.0 AGCAG ATGAGCAGCGA 0 0.9963591571215412 1 42682572 ENST00000321358.12 155 A 3 2 0 1 0 0 0.6666666666666666 ENST00000321358.12 A 65 63 0 1 1 0 0.9692307692307692 31.5 2.0 15.75 3.9772799234999163 15.75 0.12842206081890015 194.04573389735816 GCAGC TGAGCAGCGAA 4 0.4121365584278805 1 42682573 ENST00000321358.12 158 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 68 3 0 64 0 1 0.9411764705882352 16.0 1.0 16.0 4.0 0.0 1.0 1511.0 CAGCG GAGCAGCGAAC 0 0.9861106401079844 1 42682576 ENST00000321358.12 163 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 68 1 65 0 1 1 0.9558823529411764 21.66666666666667 1.0 21.66666666666667 4.437405312307297 0.0 1.0 1511.0 AGCGA AGCAGCGAACA 0 0.9921947786331362 1 42682581 ENST00000321358.12 164 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 62 0 0 60 2 0 0.967741935483871 30.0 1.0 30.0 4.906890595608519 0.0 1.0 1511.0 GCGAA GCAGCGAACAG 0 0.995697045735134 1 42682582 ENST00000321358.12 167 A 3 3 0 0 0 0 1.0 ENST00000321358.12 A 74 67 0 0 1 6 0.9054054054054054 9.571428571428571 1.0 9.571428571428571 3.2587342684001683 0.0 1.0 1511.0 CGAAC CAGCGAACAGC 1 0.9650978374077932 1 42682585 ENST00000321358.12 171 A 3 1 0 2 0 0 0.3333333333333333 ENST00000321358.12 A 64 51 1 9 3 0 0.796875 3.9230769230769234 2.0 1.9615384615384608 0.9719856238304032 1.9615384615384608 0.5109905020352785 772.1066485753058 GAACA AGCGAACAGCC 4 0.3817801784508013 1 42682589 ENST00000321358.12 173 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 68 0 67 1 0 0 0.9852941176470588 67.0 1.0 67.0 6.066089190457772 0.0 1.0 1511.0 AACAG GCGAACAGCCG 0 0.9990880408534546 1 42682591 ENST00000321358.12 174 A 3 3 0 0 0 0 1.0 ENST00000321358.12 A 68 62 2 2 2 0 0.9117647058823528 10.333333333333334 1.0 10.333333333333334 3.3692338096657206 0.0 1.0 1511.0 ACAGC CGAACAGCCGC 1 0.9697456943683884 1 42682592 ENST00000321358.12 175 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 69 2 0 67 0 0 0.9710144927536232 33.5 1.0 33.5 5.066089190457771 0.0 1.0 1511.0 CAGCC GAACAGCCGCC 0 0.9964972247010424 1 42682593 ENST00000321358.12 176 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 66 1 63 1 1 0 0.9545454545454546 21.0 1.0 21.0 4.392317422778762 0.0 1.0 1511.0 AGCCG AACAGCCGCCC 0 0.9917302613829116 1 True 42682594 ENST00000321358.12 177 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 70 1 65 0 4 0 0.9285714285714286 13.0 1.0 13.0 3.700439718141092 0.0 1.0 1511.0 GCCGC ACAGCCGCCCG 0 0.9797135239885301 1 True 42682595 ENST00000321358.12 178 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 71 0 0 69 0 2 0.9718309859154928 34.5 1.0 34.5 5.108524456778168 0.0 1.0 1511.0 CCGCC CAGCCGCCCGC 0 0.9966849035715526 1 True 42682596 ENST00000321358.12 179 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 67 1 63 2 1 0 0.9402985074626866 15.75 1.0 15.75 3.9772799234999163 0.0 1.0 1511.0 CGCCC AGCCGCCCGCC 0 0.9858391983571516 1 True 42682597 ENST00000321358.12 180 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 70 0 69 0 0 1 0.9857142857142858 69.0 1.0 69.0 6.108524456778167 0.0 1.0 1511.0 GCCCG GCCGCCCGCCC 0 0.9991377593291711 1 True 42682598 ENST00000321358.12 181 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 67 0 66 0 1 0 0.9850746268656716 66.0 1.0 66.0 6.0443941193584525 0.0 1.0 1511.0 CCCGC CCGCCCGCCCC 0 0.9990615417562416 1 True 42682599 ENST00000321358.12 182 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 65 4 0 61 0 0 0.9384615384615383 15.25 1.0 15.25 3.9307373375628862 0.0 1.0 1511.0 CCGCC CGCCCGCCCCC 0 0.9847313280611479 1 True 42682600 ENST00000321358.12 183 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 70 2 65 0 2 1 0.9285714285714286 13.0 1.0 13.0 3.700439718141092 0.0 1.0 1511.0 CGCCC GCCCGCCCCCC 0 0.9798677743097224 1 True 42682601 ENST00000321358.12 184 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 69 0 64 0 5 0 0.927536231884058 12.8 1.0 12.8 3.6780719051126383 0.0 1.0 1511.0 GCCCC CCCGCCCCCCC 0 0.9790005492175184 1 True 42682602 ENST00000321358.12 186 C 1 0 1 0 0 0 1.0 ENST00000321358.12 C 17 0 16 0 1 0 0.9411764705882352 16.0 1.0 16.0 4.0 0.0 1.0 1511.0 CCCCC CCGCCCCCCCC 0 0.9983489880596516 1 True 42682604 ENST00000321358.12 187 C 1 0 1 0 0 0 1.0 ENST00000321358.12 C 22 0 21 0 0 1 0.9545454545454546 21.0 1.0 21.0 4.392317422778762 0.0 1.0 1511.0 CCCCC CGCCCCCCCCC 0 0.9990043892076724 1 True 42682605 ENST00000321358.12 188 C 1 0 1 0 0 0 1.0 ENST00000321358.12 C 28 0 19 8 1 0 0.6785714285714286 2.1111111111111107 1.0 2.1111111111111107 1.0780025120012728 0.0 1.0 1511.0 CCCCC GCCCCCCCCCC 1 0.9441505973056056 1 True 42682606 ENST00000321358.12 189 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 57 0 54 1 2 0 0.9473684210526316 18.0 1.0 18.0 4.169925001442312 0.0 1.0 1511.0 CCCCC CCCCCCCCCCG 0 0.9889210823744072 1 True 42682607 ENST00000321358.12 190 C 3 0 2 1 0 0 0.6666666666666666 ENST00000321358.12 C 66 1 63 0 2 0 0.9545454545454546 21.0 2.0 10.5 3.39231742277876 10.5 0.16631675382677394 251.30461503225547 CCCCC CCCCCCCCCGC 7 0.14609669938859926 1 True 42682608 ENST00000321358.12 191 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 70 1 64 4 0 1 0.9142857142857144 10.666666666666666 1.0 10.666666666666666 3.415037499278844 0.0 1.0 1511.0 CCCCC CCCCCCCCGCC 1 0.9713393898035954 1 True 42682609 ENST00000321358.12 192 C 3 0 2 0 1 0 0.6666666666666666 ENST00000321358.12 C 68 1 63 0 4 0 0.9264705882352942 12.6 2.0 6.3 2.655351828612554 6.3 0.2357624004898969 356.2369871402343 CCCCG CCCCCCCGCCG 2 0.737904542396142 1 True 42682610 ENST00000321358.12 193 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 67 0 66 0 1 0 0.9850746268656716 66.0 1.0 66.0 6.0443941193584525 0.0 1.0 1511.0 CCCGC CCCCCCGCCGC 0 0.9990615417562416 1 True 42682611 ENST00000321358.12 194 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 67 3 0 64 0 0 0.9552238805970148 21.33333333333333 1.0 21.33333333333333 4.415037499278844 0.0 1.0 1511.0 CCGCC CCCCCGCCGCC 0 0.9917734609823116 1 True 42682612 ENST00000321358.12 195 C 2 0 2 0 0 0 1.0 ENST00000321358.12 C 71 2 66 0 2 1 0.9295774647887324 13.2 1.0 13.2 3.7224660244710894 0.0 1.0 1511.0 CGCCG CCCCGCCGCCC 0 0.9908162972146864 1 True 42682613 ENST00000321358.12 196 C 2 0 2 0 0 0 1.0 ENST00000321358.12 C 71 0 66 0 5 0 0.9295774647887324 13.2 1.0 13.2 3.7224660244710894 0.0 1.0 1511.0 GCCGC CCCGCCGCCCG 0 0.990599720657624 1 True 42682614 ENST00000321358.12 197 G 2 0 0 2 0 0 1.0 ENST00000321358.12 G 69 0 1 68 0 0 0.9855072463768116 68.0 1.0 68.0 6.087462841250337 0.0 1.0 1511.0 CCGCC CCGCCGCCCGT 0 0.999593748011772 1 True 42682615 ENST00000321358.12 199 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 68 1 59 0 4 4 0.8676470588235294 6.5555555555555545 1.0 6.5555555555555545 2.712718047919529 0.0 1.0 1511.0 CGCCC CGCCGCCCGTC 1 0.9346784519193744 1 True 42682617 ENST00000321358.12 200 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 71 0 70 0 1 0 0.9859154929577464 70.0 1.0 70.0 6.129283016944966 0.0 1.0 1511.0 GCCCG GCCGCCCGTCA 0 0.9991610976292996 1 True 42682618 ENST00000321358.12 202 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 72 0 65 3 3 1 0.9027777777777778 9.285714285714286 1.0 9.285714285714286 3.21501289097085 0.0 1.0 1511.0 CCCGT CCGCCCGTCAG 1 0.9634702606344012 1 True 42682620 ENST00000321358.12 203 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 73 0 3 66 2 2 0.9041095890410958 9.428571428571429 1.0 9.428571428571429 3.2370391973008483 0.0 1.0 1511.0 CCGTC CGCCCGTCAGC 1 0.9644084975481744 1 True 42682621 ENST00000321358.12 207 T 3 0 0 0 3 0 1.0 ENST00000321358.12 T 69 7 0 0 62 0 0.8985507246376812 8.857142857142858 1.0 8.857142857142858 3.146841388329272 0.0 1.0 1511.0 CGTCA GCCCGTCAGCG 1 0.9600341514213738 1 True 42682625 ENST00000321358.12 208 C 2 0 2 0 0 0 1.0 ENST00000321358.12 C 75 1 66 1 3 4 0.88 7.333333333333332 1.0 7.333333333333332 2.8744691179161412 0.0 1.0 1511.0 GTCAG CCCGTCAGCGC 0 0.9736515844964584 1 True 42682626 ENST00000321358.12 209 A 3 3 0 0 0 0 1.0 ENST00000321358.12 A 69 68 0 1 0 0 0.9855072463768116 68.0 1.0 68.0 6.087462841250337 0.0 1.0 1511.0 TCAGC CCGTCAGCGCC 0 0.9991134261918336 1 42682627 ENST00000321358.12 210 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 70 0 1 68 1 0 0.9714285714285714 34.0 1.0 34.0 5.087462841250339 0.0 1.0 1511.0 CAGCG CGTCAGCGCCG 0 0.9966564721993908 1 42682628 ENST00000321358.12 211 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 72 0 68 0 3 1 0.9444444444444444 17.0 1.0 17.0 4.087462841250339 0.0 1.0 1511.0 AGCGC GTCAGCGCCGC 0 0.9875478363410756 1 42682629 ENST00000321358.12 212 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 70 2 0 68 0 0 0.9714285714285714 34.0 1.0 34.0 5.087462841250339 0.0 1.0 1511.0 GCGCC TCAGCGCCGCC 0 0.9965930072368128 1 42682630 ENST00000321358.12 213 C 3 0 2 0 1 0 0.6666666666666666 ENST00000321358.12 C 70 2 65 0 2 1 0.9285714285714286 13.0 2.0 6.5 2.700439718141092 6.5 0.2297736188822437 347.18793813107027 CGCCG CAGCGCCGCCG 3 0.5219429170661526 1 42682631 ENST00000321358.12 214 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 72 0 68 0 2 2 0.9444444444444444 17.0 1.0 17.0 4.087462841250339 0.0 1.0 1511.0 GCCGC AGCGCCGCCGA 0 0.9788841436757054 1 42682632 ENST00000321358.12 215 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 68 1 0 67 0 0 0.9852941176470588 67.0 1.0 67.0 6.066089190457772 0.0 1.0 1511.0 CCGCC GCGCCGCCGAC 0 0.9984193491830048 1 42682633 ENST00000321358.12 216 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 68 1 65 0 2 0 0.9558823529411764 21.66666666666667 1.0 21.66666666666667 4.437405312307297 0.0 1.0 1511.0 CGCCG CGCCGCCGACA 0 0.9865028175414514 1 42682634 ENST00000321358.12 217 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 71 0 68 1 1 1 0.9577464788732394 22.66666666666667 1.0 22.66666666666667 4.502500340529184 0.0 1.0 1511.0 GCCGA GCCGCCGACAC 0 0.9876732237961506 1 42682635 ENST00000321358.12 218 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 73 0 1 69 0 3 0.9452054794520548 17.25 1.0 17.25 4.108524456778168 0.0 1.0 1511.0 CCGAC CCGCCGACACC 0 0.9794156096200338 1 42682636 ENST00000321358.12 219 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 64 62 0 1 1 0 0.96875 31.0 1.0 31.0 4.954196310386875 0.0 1.0 1511.0 CGACA CGCCGACACCA 0 0.99314169823318 1 42682637 ENST00000321358.12 220 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 69 2 63 0 2 2 0.9130434782608696 10.5 1.0 10.5 3.39231742277876 0.0 1.0 1511.0 GACAC GCCGACACCAA 1 0.95107457656151 1 42682638 ENST00000321358.12 221 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 68 59 1 2 5 1 0.8676470588235294 6.5555555555555545 1.0 6.5555555555555545 2.712718047919529 0.0 1.0 1511.0 ACACC CCGACACCAAG 1 0.8950647724705983 1 42682639 ENST00000321358.12 222 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 71 0 70 0 1 0 0.9859154929577464 70.0 1.0 70.0 6.129283016944966 0.0 1.0 1511.0 CACCA CGACACCAAGC 0 0.998544991005226 1 42682640 ENST00000321358.12 223 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 73 1 70 0 0 2 0.9589041095890408 23.33333333333333 1.0 23.33333333333333 4.5443205162238085 0.0 1.0 1511.0 ACCAA GACACCAAGCC 0 0.9881943040273148 1 42682641 ENST00000321358.12 224 A 3 3 0 0 0 0 1.0 ENST00000321358.12 A 64 59 1 2 2 0 0.921875 11.8 1.0 11.8 3.5607149544744785 0.0 1.0 1511.0 CCAAG ACACCAAGCCC 0 0.9761368268091072 1 True 42682642 ENST00000321358.12 225 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 71 65 0 6 0 0 0.9154929577464788 10.833333333333336 1.0 10.833333333333336 3.4374053123072983 0.0 1.0 1511.0 CAAGC CACCAAGCCCG 1 0.953108902391582 1 True 42682643 ENST00000321358.12 226 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 73 0 1 70 1 1 0.9589041095890408 23.33333333333333 1.0 23.33333333333333 4.5443205162238085 0.0 1.0 1511.0 AAGCC ACCAAGCCCGG 0 0.9883068996785878 1 True 42682644 ENST00000321358.12 227 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 68 1 67 0 0 0 0.9852941176470588 67.0 1.0 67.0 6.066089190457772 0.0 1.0 1511.0 AGCCC CCAAGCCCGGC 0 0.9984193491830046 1 True 42682645 ENST00000321358.12 228 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 73 0 72 0 0 1 0.9863013698630136 72.0 1.0 72.0 6.169925001442312 0.0 1.0 1511.0 GCCCG CAAGCCCGGCA 0 0.9986205793661688 1 True 42682646 ENST00000321358.12 229 C 5 0 4 0 0 1 0.8 ENST00000321358.12 C 72 1 70 0 0 1 0.9722222222222222 35.0 4.0 8.75 3.1292830169449664 8.75 0.18468899521531126 279.0650717703353 CCCGG AAGCCCGGCAC 3 0.5385596170011693 1 True 42682647 ENST00000321358.12 230 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 71 5 0 66 0 0 0.9295774647887324 13.2 1.0 13.2 3.7224660244710894 0.0 1.0 1511.0 CCGGC AGCCCGGCACT 1 0.9666646820930234 1 True 42682648 ENST00000321358.12 231 G 4 0 1 3 0 0 0.75 ENST00000321358.12 G 72 1 3 68 0 0 0.9444444444444444 17.0 3.0 5.666666666666668 2.5025003405291835 5.666666666666668 0.2426703560084951 366.6749079288362 CGGCA GCCCGGCACTA 2 0.7383558485746953 1 True 42682649 ENST00000321358.12 232 C 5 0 4 0 0 1 0.8 ENST00000321358.12 C 69 0 69 0 0 0 1.0 1.0 4.0 0.25 -2.0 inf 0.06756756756756767 102.09459459459477 GGCAC CCCGGCACTAC 6 0.2319881754149652 1 True 42682650 ENST00000321358.12 233 A 5 3 0 0 1 1 0.6 ENST00000321358.12 A 69 64 1 1 2 1 0.927536231884058 12.8 1.5 8.533333333333333 3.0931094043914813 8.533333333333333 0.06740157097093234 101.84377373707876 GCACT CCGGCACTACG 6 0.23922237168010824 1 42682651 ENST00000321358.12 234 C 4 0 3 0 1 0 0.75 ENST00000321358.12 C 70 2 63 0 4 1 0.9 9.0 3.0 3.0 1.584962500721156 3.0 0.3736279208013705 564.5517883308711 CACTA CGGCACTACGG 2 0.7893719134930017 1 42682652 ENST00000321358.12 235 T 5 0 0 0 4 1 0.8 ENST00000321358.12 T 60 0 3 0 57 0 0.95 19.0 4.0 4.75 2.2479275134435857 4.75 0.2797545196738742 422.709079227224 ACTAC GGCACTACGGG 6 0.2208171629025024 1 True 42682653 ENST00000321358.12 236 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 70 68 1 0 1 0 0.9714285714285714 34.0 1.0 34.0 5.087462841250339 0.0 1.0 1511.0 CTACG GCACTACGGGC 0 0.9942199781564508 1 True 42682654 ENST00000321358.12 237 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 74 1 71 0 1 1 0.9594594594594594 23.66666666666667 1.0 23.66666666666667 4.564784618783526 0.0 1.0 1511.0 TACGG CACTACGGGCA 0 0.9886056848063606 1 True 42682655 ENST00000321358.12 238 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 73 4 0 69 0 0 0.9452054794520548 17.25 1.0 17.25 4.108524456778168 0.0 1.0 1511.0 ACGGG ACTACGGGCAG 0 0.9877524448832832 1 True 42682656 ENST00000321358.12 239 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 73 0 0 72 1 0 0.9863013698630136 72.0 1.0 72.0 6.169925001442312 0.0 1.0 1511.0 CGGGC CTACGGGCAGC 0 0.9986205793661695 1 True 42682657 ENST00000321358.12 240 G 4 1 0 3 0 0 0.75 ENST00000321358.12 G 73 0 0 72 1 0 0.9863013698630136 72.0 3.0 24.0 4.584962500721156 24.0 0.10184552289815456 153.88858509911154 GGGCA TACGGGCAGCG 6 0.180955331609953 1 True 42682658 ENST00000321358.12 241 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 73 0 72 0 1 0 0.9863013698630136 72.0 1.0 72.0 6.169925001442312 0.0 1.0 1511.0 GGCAG ACGGGCAGCGG 0 0.9986205793661695 1 True 42682659 ENST00000321358.12 242 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 73 71 0 1 1 0 0.9726027397260274 35.5 1.0 35.5 5.149747119504682 0.0 1.0 1511.0 GCAGC CGGGCAGCGGA 0 0.9946664438963114 1 True 42682660 ENST00000321358.12 243 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 71 1 0 70 0 0 0.9859154929577464 70.0 1.0 70.0 6.129283016944966 0.0 1.0 1511.0 CAGCG GGGCAGCGGAG 0 0.9985449910052262 1 True 42682661 ENST00000321358.12 244 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 73 0 70 0 1 2 0.9589041095890408 23.33333333333333 1.0 23.33333333333333 4.5443205162238085 0.0 1.0 1511.0 AGCGG GGCAGCGGAGG 0 0.9881943040273148 1 42682662 ENST00000321358.12 245 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 69 1 0 68 0 0 0.9855072463768116 68.0 1.0 68.0 6.087462841250337 0.0 1.0 1511.0 GCGGA GCAGCGGAGGG 0 0.9984629866579581 1 True 42682663 ENST00000321358.12 246 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 73 0 1 72 0 0 0.9863013698630136 72.0 1.0 72.0 6.169925001442312 0.0 1.0 1511.0 CGGAG CAGCGGAGGGA 0 0.9986205793661695 1 True 42682664 ENST00000321358.12 250 A 4 2 0 2 0 0 0.5 ENST00000321358.12 A 65 59 1 5 0 0 0.9076923076923076 9.833333333333334 1.0 9.833333333333334 3.297680548640685 9.833333333333334 0.06330357049905093 95.65169502406596 GGAGG AGCGGAGGGAG 5 0.3349381098762925 1 True 42682668 ENST00000321358.12 251 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 65 3 0 62 0 0 0.953846153846154 20.666666666666668 1.0 20.666666666666668 4.369233809665719 0.0 1.0 1511.0 GAGGG GCGGAGGGAGC 0 0.9851791401880272 1 True 42682669 ENST00000321358.12 252 G 5 0 0 4 0 1 0.8 ENST00000321358.12 G 68 1 0 67 0 0 0.9852941176470588 67.0 4.0 16.75 4.066089190457772 16.75 0.13318112633181134 201.2366818873669 AGGGA CGGAGGGAGCG 6 0.22474584884053805 1 True 42682670 ENST00000321358.12 253 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 68 1 0 66 1 0 0.9705882352941176 33.0 1.0 33.0 5.044394119358453 0.0 1.0 1511.0 GGGAG GGAGGGAGCGG 0 0.996462506265226 1 True 42682671 ENST00000321358.12 254 A 3 3 0 0 0 0 1.0 ENST00000321358.12 A 68 65 0 3 0 0 0.9558823529411764 21.66666666666667 1.0 21.66666666666667 4.437405312307297 0.0 1.0 1511.0 GGAGC GAGGGAGCGGT 0 0.9920032307319308 1 True 42682672 ENST00000321358.12 255 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 72 2 0 68 0 2 0.9444444444444444 17.0 1.0 17.0 4.087462841250339 0.0 1.0 1511.0 GAGCG AGGGAGCGGTG 0 0.9788841436757056 1 True 42682673 ENST00000321358.12 256 C 5 0 3 0 1 1 0.6 ENST00000321358.12 C 75 3 52 1 14 5 0.6933333333333334 2.260869565217391 1.5 1.507246376811594 0.5919152613629229 1.5072463768115942 0.6453257352241388 975.0871859236736 AGCGG GGGAGCGGTGG 1 0.8505642224387351 1 True 42682674 ENST00000321358.12 257 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 75 11 0 60 0 4 0.8 4.0 1.0 4.0 2.0 0.0 1.0 1511.0 GCGGT GGAGCGGTGGC 2 0.7851030311903815 1 42682675 ENST00000321358.12 258 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 72 2 2 66 2 0 0.9166666666666666 11.0 1.0 11.0 3.4594316186372973 0.0 1.0 1511.0 CGGTG GAGCGGTGGCG 1 0.9547141839467959 1 42682676 ENST00000321358.12 259 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 72 2 2 0 68 0 0.9444444444444444 17.0 1.0 17.0 4.087462841250339 0.0 1.0 1511.0 GGTGG AGCGGTGGCGG 0 0.9788841436757088 1 42682677 ENST00000321358.12 260 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 72 0 0 71 1 0 0.9861111111111112 71.0 1.0 71.0 6.149747119504683 0.0 1.0 1511.0 GTGGC GCGGTGGCGGG 0 0.9985835443775294 1 True 42682678 ENST00000321358.12 261 G 5 0 0 4 0 1 0.8 ENST00000321358.12 G 84 0 0 73 0 11 0.8690476190476191 6.636363636363638 4.0 1.6590909090909092 0.7303929402427201 1.6590909090909092 0.5239957258954886 791.7575418280832 TGGCG CGGTGGCGGGC 0 0.996430489208136 1 True 42682679 ENST00000321358.12 264 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 75 1 72 0 0 2 0.96 24.0 1.0 24.0 4.584962500721156 0.0 1.0 1511.0 GGCGG GGTGGCGGGCG 0 0.988783192271469 1 True 42682682 ENST00000321358.12 265 G 4 2 0 2 0 0 0.5 ENST00000321358.12 G 72 9 0 63 0 0 0.875 7.0 1.0 7.0 2.807354922057604 7.0 0.09778444630643633 147.7522983690253 GCGGG GTGGCGGGCGC 3 0.549773097166516 1 True 42682683 ENST00000321358.12 266 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 75 0 0 73 0 2 0.9733333333333334 36.5 1.0 36.5 5.1898245588800185 0.0 1.0 1511.0 CGGGC TGGCGGGCGCC 0 0.9948589620672114 1 True 42682684 ENST00000321358.12 267 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 73 0 1 72 0 0 0.9863013698630136 72.0 1.0 72.0 6.169925001442312 0.0 1.0 1511.0 GGGCG GGCGGGCGCCT 0 0.9986205793661695 1 True 42682685 ENST00000321358.12 268 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 73 0 72 0 1 0 0.9863013698630136 72.0 1.0 72.0 6.169925001442312 0.0 1.0 1511.0 GGCGC GCGGGCGCCTC 0 0.9986205793661695 1 True 42682686 ENST00000321358.12 270 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 74 0 0 72 0 2 0.972972972972973 36.0 1.0 36.0 5.169925001442311 0.0 1.0 1511.0 GCGCC CGGGCGCCTCA 0 0.9947258440724828 1 True 42682688 ENST00000321358.12 271 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 73 0 72 0 0 1 0.9863013698630136 72.0 1.0 72.0 6.169925001442312 0.0 1.0 1511.0 CGCCT GGGCGCCTCAC 0 0.9986205793661688 1 True 42682689 ENST00000321358.12 272 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 73 1 71 0 0 1 0.9726027397260274 35.5 1.0 35.5 5.149747119504682 0.0 1.0 1511.0 GCCTC GGCGCCTCACA 0 0.9946664438963104 1 42682690 ENST00000321358.12 273 T 5 0 0 0 4 1 0.8 ENST00000321358.12 T 60 1 1 0 58 0 0.9666666666666668 29.0 4.0 7.25 2.8579809951275723 7.25 0.2165750915750916 327.24496336996344 CCTCA GCGCCTCACAT 6 0.2321987224446224 1 42682691 ENST00000321358.12 274 C 5 0 4 0 0 1 0.8 ENST00000321358.12 C 47 0 46 0 1 0 0.9787234042553192 46.0 4.0 11.5 3.523561956057013 11.5 0.18476621417797845 279.18174962292545 CTCAC CGCCTCACATC 5 0.2831181824919352 1 42682692 ENST00000321358.12 275 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 48 36 1 0 11 0 0.75 3.0 1.0 3.0 1.584962500721156 0.0 0.5620648259303704 849.2799519807897 TCACA GCCTCACATCG 2 0.7001237557195437 1 42682693 ENST00000321358.12 276 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 65 0 62 0 1 2 0.953846153846154 20.666666666666668 1.0 20.666666666666668 4.369233809665719 0.0 1.0 1511.0 CACAT CCTCACATCGC 0 0.985308048241631 1 42682694 ENST00000321358.12 277 A 3 3 0 0 0 0 1.0 ENST00000321358.12 A 62 59 0 0 3 0 0.9516129032258064 19.666666666666668 1.0 19.666666666666668 4.2976805486406855 0.0 1.0 1511.0 ACATC CTCACATCGCG 0 0.9904611009642972 1 42682695 ENST00000321358.12 278 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 71 0 2 0 69 0 0.9718309859154928 34.5 1.0 34.5 5.108524456778168 0.0 1.0 1511.0 CATCG TCACATCGCGG 0 0.9942938735041976 1 42682696 ENST00000321358.12 279 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 54 0 50 0 4 0 0.925925925925926 12.5 1.0 12.5 3.643856189774725 0.0 1.0 1511.0 ATCGC CACATCGCGGC 0 0.9783472152235496 1 42682697 ENST00000321358.12 280 G 3 1 0 2 0 0 0.6666666666666666 ENST00000321358.12 G 71 6 0 63 2 0 0.8873239436619719 7.875 2.0 3.9375 1.9772799234999163 3.9375 0.326175490559053 492.85116623472913 TCGCG ACATCGCGGCG 2 0.8258949605304147 1 42682698 ENST00000321358.12 282 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 80 0 74 0 0 6 0.925 12.333333333333336 1.0 12.333333333333336 3.6244908649077936 0.0 1.0 1511.0 CGCGG CATCGCGGCGC 1 0.9622546333973124 1 42682700 ENST00000321358.12 283 G 4 1 0 3 0 0 0.75 ENST00000321358.12 G 74 4 0 70 0 0 0.945945945945946 17.5 3.0 5.833333333333332 2.5443205162238103 5.833333333333332 0.23695252116304816 358.03525947736574 GCGGC ATCGCGGCGCT 2 0.8221194604037398 1 42682701 ENST00000321358.12 284 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 75 0 1 73 0 1 0.9733333333333334 36.5 1.0 36.5 5.1898245588800185 0.0 1.0 1511.0 CGGCG TCGCGGCGCTG 0 0.9949360462370852 1 42682702 ENST00000321358.12 285 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 76 0 74 0 0 2 0.9736842105263158 37.0 1.0 37.0 5.20945336562895 0.0 1.0 1511.0 GGCGC CGCGGCGCTGG 0 0.9949870951641314 1 42682703 ENST00000321358.12 286 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 72 0 0 71 0 1 0.9861111111111112 71.0 1.0 71.0 6.149747119504683 0.0 1.0 1511.0 GCGCT GCGGCGCTGGC 0 0.9985835443775284 1 42682704 ENST00000321358.12 288 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 72 0 71 0 0 1 0.9861111111111112 71.0 1.0 71.0 6.149747119504683 0.0 1.0 1511.0 CGCTG CGGCGCTGGCG 0 0.9985835443775284 1 42682706 ENST00000321358.12 289 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 71 0 2 0 69 0 0.9718309859154928 34.5 1.0 34.5 5.108524456778168 0.0 1.0 1511.0 GCTGG GGCGCTGGCGG 0 0.9942938735041976 1 42682707 ENST00000321358.12 293 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 74 3 0 70 1 0 0.945945945945946 17.5 1.0 17.5 4.129283016944966 0.0 1.0 1511.0 CTGGC GCGCTGGCGGA 0 0.9881844034659532 1 42682711 ENST00000321358.12 294 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 74 1 0 73 0 0 0.9864864864864864 73.0 1.0 73.0 6.189824558880018 0.0 1.0 1511.0 TGGCG CGCTGGCGGAC 0 0.9986561746584056 1 42682712 ENST00000321358.12 295 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 78 1 72 0 1 4 0.9230769230769232 12.0 1.0 12.0 3.584962500721156 0.0 1.0 1511.0 GGCGG GCTGGCGGACA 1 0.9608634121776538 1 42682713 ENST00000321358.12 296 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 51 1 0 50 0 0 0.9803921568627452 50.0 1.0 50.0 5.643856189774724 0.0 1.0 1511.0 GCGGA CTGGCGGACAA 0 0.9984118051728754 1 42682714 ENST00000321358.12 297 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 73 0 1 72 0 0 0.9863013698630136 72.0 1.0 72.0 6.169925001442312 0.0 1.0 1511.0 CGGAC TGGCGGACAAG 0 0.9986205793661695 1 42682715 ENST00000321358.12 300 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 76 71 0 0 3 2 0.9342105263157896 14.2 1.0 14.2 3.8278190246173196 0.0 1.0 1511.0 GGACA GGCGGACAAGA 1 0.9707652326572206 1 42682718 ENST00000321358.12 301 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 76 0 74 0 0 2 0.9736842105263158 37.0 1.0 37.0 5.20945336562895 0.0 1.0 1511.0 GACAA GCGGACAAGAG 0 0.9949870951641314 1 42682719 ENST00000321358.12 302 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 65 57 8 0 0 0 0.8769230769230769 7.125 1.0 7.125 2.8328900141647417 0.0 1.0 1511.0 ACAAG CGGACAAGAGG 1 0.9072670043947084 1 42682720 ENST00000321358.12 303 A 3 3 0 0 0 0 1.0 ENST00000321358.12 A 73 56 0 13 1 3 0.7671232876712328 3.294117647058824 1.0 3.294117647058824 1.7198920808072646 0.0 1.0 1511.0 CAAGA GGACAAGAGGT 2 0.8177817360330591 1 42682721 ENST00000321358.12 304 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 73 0 0 72 0 1 0.9863013698630136 72.0 1.0 72.0 6.169925001442312 0.0 1.0 1511.0 AAGAG GACAAGAGGTC 0 0.9992050002012892 1 42682722 ENST00000321358.12 305 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 72 69 1 1 1 0 0.9583333333333334 23.0 1.0 23.0 4.523561956057013 0.0 1.0 1511.0 AGAGG ACAAGAGGTCG 0 0.9879962895504998 1 42682723 ENST00000321358.12 307 G 5 0 0 4 0 1 0.8 ENST00000321358.12 G 76 0 0 76 0 0 1.0 1.0 4.0 0.25 -2.0 inf 0.061728395061728426 93.27160493827164 GAGGT CAAGAGGTCGC 6 0.21688909353830985 1 42682725 ENST00000321358.12 308 G 5 0 0 4 0 1 0.8 ENST00000321358.12 G 78 0 0 77 0 1 0.9871794871794872 77.0 4.0 19.25 4.266786540694901 19.25 0.11754334410813995 177.60799294739945 AGGTC AAGAGGTCGCA 3 0.5329606588388469 1 42682726 ENST00000321358.12 309 T 4 0 1 0 3 0 0.75 ENST00000321358.12 T 75 0 0 0 75 0 1.0 1.0 3.0 0.3333333333333333 -1.5849625007211563 inf 0.05063291139240494 76.50632911392384 GGTCG AGAGGTCGCAC 6 0.18286237630605964 1 42682727 ENST00000321358.12 313 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 72 0 70 1 1 0 0.9722222222222222 35.0 1.0 35.0 5.1292830169449655 0.0 1.0 1511.0 GTCGC GAGGTCGCACG 0 0.9945235278428578 1 42682731 ENST00000321358.12 314 G 5 0 0 4 0 1 0.8 ENST00000321358.12 G 74 1 0 72 1 0 0.972972972972973 36.0 4.0 9.0 3.169925001442312 9.0 0.18026277519948397 272.37705332642025 TCGCA AGGTCGCACGA 6 0.2043734642965348 1 42682732 ENST00000321358.12 315 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 77 1 64 0 10 2 0.8311688311688312 4.9230769230769225 1.0 4.9230769230769225 2.2995602818589083 0.0 1.0 1511.0 CGCAC GGTCGCACGAG 1 0.8382420971841312 1 42683403 ENST00000321358.12 316 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 81 74 0 0 3 4 0.9135802469135802 10.571428571428571 1.0 10.571428571428571 3.402098443571345 0.0 1.0 1511.0 GCACG GTCGCACGAGG 1 0.9510405243288019 1 42683404 ENST00000321358.12 318 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 75 0 73 0 2 0 0.9733333333333334 36.5 1.0 36.5 5.1898245588800185 0.0 1.0 1511.0 CACGA TCGCACGAGGT 0 0.994858962067212 1 42683405 ENST00000321358.12 319 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 83 0 0 76 1 6 0.9156626506024096 10.857142857142858 1.0 10.857142857142858 3.4405725913859815 0.0 1.0 1511.0 ACGAG CGCACGAGGTT 1 0.953145895036432 1 42683407 ENST00000321358.12 321 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 80 77 0 0 0 3 0.9625 25.66666666666667 1.0 25.66666666666667 4.681824039973745 0.0 1.0 1511.0 CGAGG GCACGAGGTTT 0 0.9899683261031084 1 True 42683408 ENST00000321358.12 322 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 80 2 0 77 0 1 0.9625 25.66666666666667 1.0 25.66666666666667 4.681824039973745 0.0 1.0 1511.0 GAGGT CACGAGGTTTT 0 0.9900766396574632 1 True 42683410 ENST00000321358.12 323 G 4 0 0 3 1 0 0.75 ENST00000321358.12 G 81 0 0 79 0 2 0.9753086419753086 39.5 3.0 13.166666666666664 3.7188182474559466 13.166666666666664 0.136174951908474 205.7603523337043 AGGTT ACGAGGTTTTG 7 0.16358721059736706 1 True 42683411 ENST00000321358.12 324 T 3 0 0 0 3 0 1.0 ENST00000321358.12 T 50 0 0 1 49 0 0.98 49.0 1.0 49.0 5.614709844115208 0.0 1.0 1511.0 GGTTT CGAGGTTTTGG 0 0.9983502151277428 1 True 42683412 ENST00000321358.12 325 T 3 0 2 0 1 0 0.3333333333333333 ENST00000321358.12 T 83 0 2 0 76 5 0.9156626506024096 10.857142857142858 2.0 5.428571428571429 2.440572591385981 5.428571428571429 0.2566347469220255 387.7751025991805 GTTTT GAGGTTTTGGA 10 0.04379121458138579 1 True 42683413 ENST00000321358.12 326 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 79 0 4 2 73 0 0.9240506329113924 12.166666666666664 1.0 12.166666666666664 3.6048620581588615 0.0 1.0 1511.0 TTTTG AGGTTTTGGAA 1 0.9615839565355608 1 True 42683414 ENST00000321358.12 327 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 78 1 1 4 71 1 0.9102564102564102 10.142857142857142 1.0 10.142857142857142 3.342392197447078 0.0 1.0 1511.0 TTTGG GGTTTTGGAAC 1 0.9479989600707812 1 True 42683415 ENST00000321358.12 328 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 70 0 0 65 5 0 0.9285714285714286 13.0 1.0 13.0 3.700439718141092 0.0 1.0 1511.0 TTGGA GTTTTGGAACA 0 0.979562678027868 1 True 42683416 ENST00000321358.12 330 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 79 0 1 78 0 0 0.9873417721518988 78.0 1.0 78.0 6.285402218862249 0.0 1.0 1511.0 TGGAA TTTTGGAACAT 0 0.9988149780058492 1 True 42683417 ENST00000321358.12 331 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 80 78 0 1 0 1 0.975 39.0 1.0 39.0 5.28540221886225 0.0 1.0 1511.0 GGAAC TTTGGAACATA 0 0.9955272260136208 1 True 42683419 ENST00000321358.12 332 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 80 79 0 0 1 0 0.9875 79.0 1.0 79.0 6.303780748177103 0.0 1.0 1511.0 GAACA TTGGAACATAA 0 0.9988433307276868 1 42683420 ENST00000321358.12 333 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 79 0 78 0 1 0 0.9873417721518988 78.0 1.0 78.0 6.285402218862249 0.0 1.0 1511.0 AACAT TGGAACATAAT 0 0.9988149780058492 1 42683421 ENST00000321358.12 334 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 80 78 0 2 0 0 0.975 39.0 1.0 39.0 5.28540221886225 0.0 1.0 1511.0 ACATA GGAACATAATG 0 0.9954544754459264 1 42683422 ENST00000321358.12 336 T 5 0 0 0 4 1 0.8 ENST00000321358.12 T 81 0 0 0 78 3 0.9629629629629628 26.0 4.0 6.5 2.700439718141092 6.5 0.2165307703355932 327.1779939770813 CATAA GAACATAATGG 2 0.7925699840359801 1 42683423 ENST00000321358.12 339 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 78 77 0 0 1 0 0.9871794871794872 77.0 1.0 77.0 6.266786540694902 0.0 1.0 1511.0 ATAAT AACATAATGGT 0 0.9987855643035156 1 42683425 ENST00000321358.12 340 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 78 77 0 0 1 0 0.9871794871794872 77.0 1.0 77.0 6.266786540694902 0.0 1.0 1511.0 TAATG ACATAATGGTT 0 0.9987855643035156 1 42683428 ENST00000321358.12 341 T 5 0 0 0 4 1 0.8 ENST00000321358.12 T 79 0 2 0 77 0 0.9746835443037974 38.5 4.0 9.625 3.2667865406949015 9.625 0.17007052600646508 256.97656479576875 AATGG CATAATGGTTC 6 0.19598485776552946 1 42683429 ENST00000321358.12 342 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 79 2 0 77 0 0 0.9746835443037974 38.5 1.0 38.5 5.266786540694901 0.0 1.0 1511.0 ATGGT ATAATGGTTCA 0 0.9953439687749316 1 42683430 ENST00000321358.12 343 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 89 0 0 81 0 8 0.9101123595505618 10.125 1.0 10.125 3.3398500028846247 0.0 1.0 1511.0 TGGTT TAATGGTTCAA 1 0.9468755077564788 1 42683431 ENST00000321358.12 344 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 78 1 0 0 77 0 0.9871794871794872 77.0 1.0 77.0 6.266786540694902 0.0 1.0 1511.0 GGTTC AATGGTTCAAT 0 0.9987855643035156 1 42683432 ENST00000321358.12 345 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 82 2 0 0 79 1 0.9634146341463414 26.33333333333333 1.0 26.33333333333333 4.718818247455947 0.0 1.0 1511.0 GTTCA ATGGTTCAATG 0 0.9905322500758266 1 42683433 ENST00000321358.12 346 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 83 0 79 0 2 2 0.9518072289156626 19.75 1.0 19.75 4.303780748177103 0.0 1.0 1511.0 TTCAA TGGTTCAATGT 0 0.983824521200821 1 42683434 ENST00000321358.12 347 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 79 78 0 1 0 0 0.9873417721518988 78.0 1.0 78.0 6.285402218862249 0.0 1.0 1511.0 TCAAT GGTTCAATGTA 0 0.9988149780058492 1 42683435 ENST00000321358.12 348 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 81 79 1 1 0 0 0.9753086419753086 39.5 1.0 39.5 5.303780748177103 0.0 1.0 1511.0 CAATG GTTCAATGTAA 0 0.9956330280421256 1 42683436 ENST00000321358.12 349 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 82 0 2 0 79 1 0.9634146341463414 26.33333333333333 1.0 26.33333333333333 4.718818247455947 0.0 1.0 1511.0 AATGT TTCAATGTAAA 0 0.9905322500758266 1 True 42683437 ENST00000321358.12 350 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 87 0 0 82 0 5 0.9425287356321842 16.4 1.0 16.4 4.035623909730721 0.0 1.0 1511.0 ATGTA TCAATGTAAAC 0 0.9770960339427516 1 True 42683438 ENST00000321358.12 351 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 83 0 0 0 80 3 0.9638554216867472 26.66666666666667 1.0 26.66666666666667 4.736965594166207 0.0 1.0 1511.0 TGTAA CAATGTAAACG 0 0.9906434646097404 1 True 42683439 ENST00000321358.12 352 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 77 76 0 1 0 0 0.987012987012987 76.0 1.0 76.0 6.247927513443584 0.0 1.0 1511.0 GTAAA AATGTAAACGT 0 0.9987550360205878 1 True 42683440 ENST00000321358.12 353 A 5 4 0 0 0 1 0.8 ENST00000321358.12 A 84 78 1 1 0 4 0.9285714285714286 13.0 4.0 3.25 1.7004397181410922 3.25 0.34264307281054435 517.7336830167325 TAAAC ATGTAAACGTA 2 0.8206019956366339 1 True 42683441 ENST00000321358.12 356 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 83 82 0 0 0 1 0.9879518072289156 82.0 1.0 82.0 6.357552004618085 0.0 1.0 1511.0 AAACG TGTAAACGTAG 0 0.9989225125935792 1 True 42683442 ENST00000321358.12 358 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 84 0 83 0 0 1 0.988095238095238 83.0 1.0 83.0 6.3750394313469245 0.0 1.0 1511.0 AACGT GTAAACGTAGG 0 0.9989470969897928 1 True 42683445 ENST00000321358.12 359 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 83 2 1 80 0 0 0.9638554216867472 26.66666666666667 1.0 26.66666666666667 4.736965594166207 0.0 1.0 1511.0 ACGTA TAAACGTAGGC 0 0.9907484132908746 1 True 42683447 ENST00000321358.12 362 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 85 0 0 0 79 6 0.9294117647058824 13.166666666666664 1.0 13.166666666666664 3.7188182474559466 0.0 1.0 1511.0 CGTAG AAACGTAGGCA 1 0.9662249462147988 1 True 42683448 ENST00000321358.12 363 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 80 77 1 1 1 0 0.9625 25.66666666666667 1.0 25.66666666666667 4.681824039973745 0.0 1.0 1511.0 GTAGG AACGTAGGCAA 0 0.9901807731378892 1 42683451 ENST00000321358.12 365 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 82 1 1 79 1 0 0.9634146341463414 26.33333333333333 1.0 26.33333333333333 4.718818247455947 0.0 1.0 1511.0 TAGGC ACGTAGGCAAC 0 0.9906341898770245 1 42683452 ENST00000321358.12 366 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 84 0 0 83 0 1 0.988095238095238 83.0 1.0 83.0 6.3750394313469245 0.0 1.0 1511.0 AGGCA CGTAGGCAACG 0 0.9989470969897928 1 42683454 ENST00000321358.12 370 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 76 0 75 0 1 0 0.986842105263158 75.0 1.0 75.0 6.22881869049588 0.0 1.0 1511.0 GGCAA GTAGGCAACGA 0 0.9992646208206848 1 42683455 ENST00000321358.12 371 A 3 3 0 0 0 0 1.0 ENST00000321358.12 A 75 74 0 0 0 1 0.9866666666666668 74.0 1.0 74.0 6.209453365628951 0.0 1.0 1511.0 GCAAC TAGGCAACGAA 0 0.9992455210322192 1 42683459 ENST00000321358.12 375 A 4 3 0 0 1 0 0.75 ENST00000321358.12 A 84 81 0 1 2 0 0.9642857142857144 27.0 3.0 9.0 3.169925001442312 9.0 0.17255916874295066 260.73690397059846 CAACG AGGCAACGAAT 3 0.5851009370042322 1 42683460 ENST00000321358.12 376 C 4 0 3 0 1 0 0.75 ENST00000321358.12 C 83 0 82 0 1 0 0.9879518072289156 82.0 3.0 27.33333333333333 4.772589503896928 27.33333333333333 0.09035017375033406 136.51911253675476 AACGA GGCAACGAATA 4 0.4450081843704333 1 42683464 ENST00000321358.12 379 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 86 0 0 84 0 2 0.9767441860465116 42.0 1.0 42.0 5.392317422778762 0.0 1.0 1511.0 ACGAA GCAACGAATAA 0 0.996041695164794 1 42683465 ENST00000321358.12 380 A 3 3 0 0 0 0 1.0 ENST00000321358.12 A 83 82 0 1 0 0 0.9879518072289156 82.0 1.0 82.0 6.357552004618085 0.0 1.0 1511.0 CGAAT CAACGAATAAC 0 0.9993799746914368 1 42693491 ENST00000321358.12 381 A 3 3 0 0 0 0 1.0 ENST00000321358.12 A 84 83 1 0 0 0 0.988095238095238 83.0 1.0 83.0 6.3750394313469245 0.0 1.0 1511.0 GAATA AACGAATAACC 0 0.9993941928827448 1 42693492 ENST00000321358.12 382 T 4 0 1 0 3 0 0.75 ENST00000321358.12 T 85 0 2 0 82 1 0.9647058823529412 27.33333333333333 3.0 9.111111111111107 3.187627003175771 9.111111111111107 0.1707227069174396 257.96201015225125 AATAA ACGAATAACCA 3 0.5816370093068967 1 42693493 ENST00000321358.12 384 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 84 83 0 0 0 1 0.988095238095238 83.0 1.0 83.0 6.3750394313469245 0.0 1.0 1511.0 ATAAC CGAATAACCAA 0 0.9989470969897928 1 42693494 ENST00000321358.12 386 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 79 77 2 0 0 0 0.9746835443037974 38.5 1.0 38.5 5.266786540694901 0.0 1.0 1511.0 TAACC GAATAACCAAG 0 0.9953439687749316 1 42693496 ENST00000321358.12 387 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 85 1 82 0 1 1 0.9647058823529412 27.33333333333333 1.0 27.33333333333333 4.772589503896928 0.0 1.0 1511.0 AACCA AATAACCAAGA 0 0.9912579876116594 1 42693498 ENST00000321358.12 388 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 88 0 84 0 0 4 0.9545454545454546 21.0 1.0 21.0 4.392317422778762 0.0 1.0 1511.0 ACCAA ATAACCAAGAA 0 0.985381534131228 1 42693499 ENST00000321358.12 389 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 83 76 1 0 5 1 0.9156626506024096 10.857142857142858 1.0 10.857142857142858 3.4405725913859815 0.0 1.0 1511.0 CCAAG TAACCAAGAAT 1 0.9533570408790562 1 42693500 ENST00000321358.12 390 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 84 78 1 3 1 1 0.9285714285714286 13.0 1.0 13.0 3.700439718141092 0.0 1.0 1511.0 CAAGA AACCAAGAATG 1 0.9660417884342506 1 42693501 ENST00000321358.12 391 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 82 1 0 81 0 0 0.9878048780487804 81.0 1.0 81.0 6.339850002884624 0.0 1.0 1511.0 AAGAA ACCAAGAATGT 0 0.9993652450071948 1 42693502 ENST00000321358.12 393 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 85 82 1 0 1 1 0.9647058823529412 27.33333333333333 1.0 27.33333333333333 4.772589503896928 0.0 1.0 1511.0 AGAAT CCAAGAATGTA 0 0.9912579876116594 1 42693503 ENST00000321358.12 394 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 84 83 0 0 1 0 0.988095238095238 83.0 1.0 83.0 6.3750394313469245 0.0 1.0 1511.0 GAATG CAAGAATGTAT 0 0.9989470969897936 1 42693505 ENST00000321358.12 397 T 4 0 1 0 3 0 0.75 ENST00000321358.12 T 84 0 3 0 81 0 0.9642857142857144 27.0 3.0 9.0 3.169925001442312 9.0 0.17255916874295066 260.73690397059846 AATGT AAGAATGTATT 2 0.7061227930125907 1 42693506 ENST00000321358.12 398 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 85 0 0 84 0 1 0.9882352941176472 84.0 1.0 84.0 6.3923174227787625 0.0 1.0 1511.0 ATGTA AGAATGTATTT 0 0.9989708448810688 1 True 42693509 ENST00000321358.12 399 T 3 0 0 0 3 0 1.0 ENST00000321358.12 T 83 1 2 0 80 0 0.9638554216867472 26.66666666666667 1.0 26.66666666666667 4.736965594166207 0.0 1.0 1511.0 TGTAT GAATGTATTTT 0 0.9946276548576332 1 True 42693510 ENST00000321358.12 400 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 84 81 0 0 1 2 0.9642857142857144 27.0 1.0 27.0 4.754887502163468 0.0 1.0 1511.0 GTATT AATGTATTTTA 0 0.9909572797148112 1 True 42693511 ENST00000321358.12 401 T 5 1 0 0 3 1 0.6 ENST00000321358.12 T 84 1 0 0 81 2 0.9642857142857144 27.0 1.5 18.0 4.169925001442312 18.0 0.02380576087651526 35.970504684414564 TATTT ATGTATTTTAA 6 0.19693133166323304 1 True 42693512 ENST00000321358.12 402 T 5 0 0 0 4 1 0.8 ENST00000321358.12 T 88 1 6 0 77 4 0.875 7.0 4.0 1.75 0.8073549220576041 1.75 0.5070047433695256 766.0841672313531 ATTTT TGTATTTTAAC 2 0.7198538715630138 1 True 42693513 ENST00000321358.12 403 T 4 0 1 0 3 0 0.75 ENST00000321358.12 T 89 0 0 2 82 5 0.9213483146067416 11.714285714285715 3.0 3.9047619047619047 1.9652345818393235 3.9047619047619047 0.3065175435441909 463.1480082952725 TTTTA GTATTTTAACC 7 0.13411096432974626 1 True 42693514 ENST00000321358.12 405 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 97 0 1 0 83 13 0.8556701030927835 5.928571428571429 1.0 5.928571428571429 2.567684509289321 0.0 1.0 1511.0 TTTAA TATTTTAACCA 1 0.8752271943355754 1 True 42693515 ENST00000321358.12 406 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 80 79 0 0 1 0 0.9875 79.0 1.0 79.0 6.303780748177103 0.0 1.0 1511.0 TTAAC ATTTTAACCAG 0 0.9988433307276868 1 True 42693517 ENST00000321358.12 408 A 3 3 0 0 0 0 1.0 ENST00000321358.12 A 83 81 1 0 1 0 0.9759036144578314 40.5 1.0 40.5 5.339850002884624 0.0 1.0 1511.0 TAACC TTTTAACCAGA 0 0.9976024613040072 1 True 42693518 ENST00000321358.12 409 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 84 0 83 0 1 0 0.988095238095238 83.0 1.0 83.0 6.3750394313469245 0.0 1.0 1511.0 AACCA TTTAACCAGAC 0 0.9989470969897936 1 True 42693520 ENST00000321358.12 410 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 85 0 84 0 0 1 0.9882352941176472 84.0 1.0 84.0 6.3923174227787625 0.0 1.0 1511.0 ACCAG TTAACCAGACT 0 0.9989708448810688 1 42693521 ENST00000321358.12 411 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 85 82 0 2 0 1 0.9647058823529412 27.33333333333333 1.0 27.33333333333333 4.772589503896928 0.0 1.0 1511.0 CCAGA TAACCAGACTG 0 0.991159173599826 1 42693522 ENST00000321358.12 412 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 86 0 0 84 0 2 0.9767441860465116 42.0 1.0 42.0 5.392317422778762 0.0 1.0 1511.0 CAGAC AACCAGACTGC 0 0.996041695164794 1 42693523 ENST00000321358.12 413 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 87 84 0 0 0 3 0.9655172413793104 28.0 1.0 28.0 4.807354922057604 0.0 1.0 1511.0 AGACT ACCAGACTGCA 0 0.9914424824412534 1 42693524 ENST00000321358.12 414 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 84 1 82 0 1 0 0.9761904761904762 41.0 1.0 41.0 5.357552004618084 0.0 1.0 1511.0 GACTG CCAGACTGCAT 0 0.9959289235924704 1 42696199 ENST00000321358.12 415 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 85 0 2 0 82 1 0.9647058823529412 27.33333333333333 1.0 27.33333333333333 4.772589503896928 0.0 1.0 1511.0 ACTGC CAGACTGCATA 0 0.9911591735998284 1 42696200 ENST00000321358.12 416 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 83 1 0 81 1 0 0.9759036144578314 40.5 1.0 40.5 5.339850002884624 0.0 1.0 1511.0 CTGCA AGACTGCATAA 0 0.9958337117003054 1 42696201 ENST00000321358.12 417 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 85 0 82 0 1 2 0.9647058823529412 27.33333333333333 1.0 27.33333333333333 4.772589503896928 0.0 1.0 1511.0 TGCAT GACTGCATAAG 0 0.991159173599826 1 42696202 ENST00000321358.12 419 A 2 2 0 0 0 0 1.0 ENST00000321358.12 A 54 52 2 0 0 0 0.9629629629629628 26.0 1.0 26.0 4.700439718141092 0.0 1.0 1511.0 GCATA ACTGCATAAGA 0 0.9973983082177678 1 42696203 ENST00000321358.12 420 T 2 0 1 0 1 0 0.5 ENST00000321358.12 T 52 2 2 0 46 2 0.8846153846153846 7.666666666666668 1.0 7.666666666666668 2.9385994553358565 7.666666666666668 0.2445842068483577 369.56673654786835 CATAA CTGCATAAGAG 4 0.4616868771100438 1 42696204 ENST00000321358.12 421 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 76 74 2 0 0 0 0.9736842105263158 37.0 1.0 37.0 5.20945336562895 0.0 1.0 1511.0 ATAAG TGCATAAGAGA 0 0.9949870951641332 1 42696206 ENST00000321358.12 422 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 84 83 0 0 1 0 0.988095238095238 83.0 1.0 83.0 6.3750394313469245 0.0 1.0 1511.0 TAAGA GCATAAGAGAT 0 0.9989470969897936 1 42696207 ENST00000321358.12 424 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 86 0 0 84 0 2 0.9767441860465116 42.0 1.0 42.0 5.392317422778762 0.0 1.0 1511.0 AAGAG CATAAGAGATA 0 0.996041695164794 1 42696208 ENST00000321358.12 426 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 83 82 0 1 0 0 0.9879518072289156 82.0 1.0 82.0 6.357552004618085 0.0 1.0 1511.0 AGAGA ATAAGAGATAA 0 0.9989225125935794 1 42696209 ENST00000321358.12 427 G 5 0 0 4 0 1 0.8 ENST00000321358.12 G 96 0 0 83 0 13 0.8645833333333334 6.384615384615384 4.0 1.5961538461538465 0.6745997132058327 1.5961538461538465 0.5335129094647347 806.1380062012141 GAGAT TAAGAGATAAC 0 0.9972866962508375 1 42696211 ENST00000321358.12 429 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 84 83 0 0 0 1 0.988095238095238 83.0 1.0 83.0 6.3750394313469245 0.0 1.0 1511.0 AGATA AAGAGATAACC 0 0.9989470969897928 1 42696213 ENST00000321358.12 430 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 83 2 0 0 81 0 0.9759036144578314 40.5 1.0 40.5 5.339850002884624 0.0 1.0 1511.0 GATAA AGAGATAACCC 0 0.9957633363675524 1 True 42696214 ENST00000321358.12 431 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 85 82 0 0 2 1 0.9647058823529412 27.33333333333333 1.0 27.33333333333333 4.772589503896928 0.0 1.0 1511.0 ATAAC GAGATAACCCC 0 0.991159173599826 1 True 42696216 ENST00000321358.12 432 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 86 83 0 0 1 2 0.9651162790697676 27.66666666666667 1.0 27.66666666666667 4.7900769306257684 0.0 1.0 1511.0 TAACC AGATAACCCCA 0 0.9913544014020396 1 True 42696217 ENST00000321358.12 433 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 54 0 53 0 1 0 0.9814814814814816 53.0 1.0 53.0 5.7279204545632005 0.0 1.0 1511.0 AACCC GATAACCCCAA 0 0.9975452149431112 1 True 42696218 ENST00000321358.12 434 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 84 0 82 0 2 0 0.9761904761904762 41.0 1.0 41.0 5.357552004618084 0.0 1.0 1511.0 ACCCC ATAACCCCAAT 0 0.9958593061014966 1 True 42696219 ENST00000321358.12 435 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 85 1 82 0 1 1 0.9647058823529412 27.33333333333333 1.0 27.33333333333333 4.772589503896928 0.0 1.0 1511.0 CCCCA TAACCCCAATA 0 0.9912579876116594 1 True 42696220 ENST00000321358.12 436 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 83 6 77 0 0 0 0.927710843373494 12.833333333333336 1.0 12.833333333333336 3.6818240399737454 0.0 1.0 1511.0 CCCAA AACCCCAATAC 1 0.9647154876473188 1 True 42696221 ENST00000321358.12 437 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 84 76 0 6 1 1 0.9047619047619048 9.5 1.0 9.5 3.2479275134435857 0.0 1.0 1511.0 CCAAT ACCCCAATACC 1 0.9415068310456584 1 True 42696222 ENST00000321358.12 440 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 84 83 1 0 0 0 0.988095238095238 83.0 1.0 83.0 6.3750394313469245 0.0 1.0 1511.0 CAATA CCCCAATACCT 0 0.9989470969897936 1 True 42696223 ENST00000321358.12 443 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 84 0 0 0 83 1 0.988095238095238 83.0 1.0 83.0 6.3750394313469245 0.0 1.0 1511.0 AATAC CCCAATACCTT 0 0.9989470969897928 1 True 42696224 ENST00000321358.12 444 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 83 82 0 0 0 1 0.9879518072289156 82.0 1.0 82.0 6.357552004618085 0.0 1.0 1511.0 ATACC CCAATACCTTC 0 0.9989225125935792 1 42696227 ENST00000321358.12 445 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 82 0 81 0 0 1 0.9878048780487804 81.0 1.0 81.0 6.339850002884624 0.0 1.0 1511.0 TACCT CAATACCTTCG 0 0.9988970519396764 1 42696230 ENST00000321358.12 446 C 5 0 4 0 0 1 0.8 ENST00000321358.12 C 86 1 82 0 0 3 0.9534883720930232 20.5 4.0 5.125 2.357552004618084 5.125 0.2511190647571902 379.4409068481144 ACCTT AATACCTTCGC 2 0.7579321441646159 1 42696231 ENST00000321358.12 447 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 71 1 3 0 67 0 0.943661971830986 16.75 1.0 16.75 4.066089190457772 0.0 1.0 1511.0 CCTTC ATACCTTCGCA 0 0.9783212976820722 1 42696232 ENST00000321358.12 448 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 78 2 2 0 74 0 0.9487179487179488 18.5 1.0 18.5 4.20945336562895 0.0 1.0 1511.0 CTTCG TACCTTCGCAG 0 0.9818202877126702 1 42696233 ENST00000321358.12 449 C 4 0 3 0 1 0 0.75 ENST00000321358.12 C 68 0 61 0 7 0 0.8970588235294118 8.714285714285714 3.0 2.9047619047619047 1.538419914784126 2.9047619047619047 0.3824045723617072 577.8133088385397 TTCGC ACCTTCGCAGT 1 0.9573037687958718 1 42696234 ENST00000321358.12 450 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 72 4 0 66 2 0 0.9166666666666666 11.0 1.0 11.0 3.4594316186372973 0.0 1.0 1511.0 TCGCA CCTTCGCAGTG 1 0.9545007816420452 1 42696235 ENST00000321358.12 451 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 83 2 74 1 5 1 0.891566265060241 8.222222222222221 1.0 8.222222222222221 3.0395283641866366 0.0 1.0 1511.0 CGCAG CTTCGCAGTGT 1 0.9260818267536136 1 42696236 ENST00000321358.12 452 A 4 3 0 1 0 0 0.75 ENST00000321358.12 A 83 72 0 9 1 1 0.8674698795180723 6.545454545454546 3.0 2.1818181818181817 1.1255308820838592 2.1818181818181817 0.4539499841636725 685.9184260713091 GCAGT TTCGCAGTGTA 1 0.9444636336944144 1 42696237 ENST00000321358.12 453 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 81 0 1 80 0 0 0.9876543209876544 80.0 1.0 80.0 6.321928094887363 0.0 1.0 1511.0 CAGTG TCGCAGTGTAG 0 0.9988706728861868 1 42696238 ENST00000321358.12 454 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 81 1 0 0 79 1 0.9753086419753086 39.5 1.0 39.5 5.303780748177103 0.0 1.0 1511.0 AGTGT CGCAGTGTAGG 0 0.9956330280421256 1 42696239 ENST00000321358.12 455 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 85 0 0 83 0 2 0.976470588235294 41.5 1.0 41.5 5.3750394313469245 0.0 1.0 1511.0 GTGTA GCAGTGTAGGA 0 0.9959520445630764 1 42696240 ENST00000321358.12 456 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 82 0 6 3 73 0 0.8902439024390244 8.11111111111111 1.0 8.11111111111111 3.019899557437705 0.0 1.0 1511.0 TGTAG CAGTGTAGGAA 1 0.92397495447538 1 42696241 ENST00000321358.12 457 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 78 65 0 11 2 0 0.8333333333333334 5.0 1.0 5.0 2.3219280948873617 0.0 1.0 1511.0 GTAGG AGTGTAGGAAT 1 0.8413734176046865 1 42696242 ENST00000321358.12 458 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 82 2 0 78 2 0 0.951219512195122 19.5 1.0 19.5 4.285402218862249 0.0 1.0 1511.0 TAGGA GTGTAGGAATG 0 0.9903029789315128 1 42696243 ENST00000321358.12 459 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 81 1 1 79 0 0 0.9753086419753086 39.5 1.0 39.5 5.303780748177103 0.0 1.0 1511.0 AGGAA TGTAGGAATGA 0 0.9956330280421256 1 42696244 ENST00000321358.12 460 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 83 81 0 1 0 1 0.9759036144578314 40.5 1.0 40.5 5.339850002884624 0.0 1.0 1511.0 GGAAT GTAGGAATGAG 0 0.9958337117003038 1 42696245 ENST00000321358.12 462 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 85 84 0 0 0 1 0.9882352941176472 84.0 1.0 84.0 6.3923174227787625 0.0 1.0 1511.0 GAATG TAGGAATGAGC 0 0.9989708448810688 1 42696246 ENST00000321358.12 463 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 87 0 0 0 84 3 0.9655172413793104 28.0 1.0 28.0 4.807354922057604 0.0 1.0 1511.0 AATGA AGGAATGAGCT 0 0.9914424824412561 1 42696247 ENST00000321358.12 465 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 70 1 0 69 0 0 0.9857142857142858 69.0 1.0 69.0 6.108524456778167 0.0 1.0 1511.0 ATGAG GGAATGAGCTG 0 0.9985048351132788 1 42696249 ENST00000321358.12 466 A 5 4 0 0 0 1 0.8 ENST00000321358.12 A 69 69 0 0 0 0 1.0 1.0 4.0 0.25 -2.0 inf 0.06756756756756767 102.09459459459477 TGAGC GAATGAGCTGG 6 0.2319881754149652 1 42696250 ENST00000321358.12 467 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 83 0 1 82 0 0 0.9879518072289156 82.0 1.0 82.0 6.357552004618085 0.0 1.0 1511.0 GAGCT AATGAGCTGGG 0 0.9989225125935794 1 True 42696252 ENST00000321358.12 471 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 85 0 84 0 0 1 0.9882352941176472 84.0 1.0 84.0 6.3923174227787625 0.0 1.0 1511.0 AGCTG ATGAGCTGGGT 0 0.9989708448810688 1 True 42696253 ENST00000321358.12 472 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 81 1 0 0 80 0 0.9876543209876544 80.0 1.0 80.0 6.321928094887363 0.0 1.0 1511.0 GCTGG TGAGCTGGGTT 0 0.9988706728861868 1 True 42696254 ENST00000321358.12 473 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 87 1 0 80 0 6 0.9195402298850576 11.428571428571427 1.0 11.428571428571427 3.5145731728297585 0.0 1.0 1511.0 CTGGG GAGCTGGGTTT 1 0.9569986180163172 1 True 42696258 ENST00000321358.12 475 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 82 1 0 81 0 0 0.9878048780487804 81.0 1.0 81.0 6.339850002884624 0.0 1.0 1511.0 TGGGT AGCTGGGTTTG 0 0.9988970519396771 1 True 42696259 ENST00000321358.12 476 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 85 1 0 82 0 2 0.9647058823529412 27.33333333333333 1.0 27.33333333333333 4.772589503896928 0.0 1.0 1511.0 GGGTT GCTGGGTTTGA 0 0.9911591735998262 1 True 42696260 ENST00000321358.12 479 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 87 0 0 0 84 3 0.9655172413793104 28.0 1.0 28.0 4.807354922057604 0.0 1.0 1511.0 GGTTT CTGGGTTTGAT 0 0.9914424824412561 1 True 42696262 ENST00000321358.12 480 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 84 0 6 0 78 0 0.9285714285714286 13.0 1.0 13.0 3.700439718141092 0.0 1.0 1511.0 GTTTG TGGGTTTGATG 1 0.9654825698670318 1 True 42696263 ENST00000321358.12 481 T 4 0 1 0 3 0 0.75 ENST00000321358.12 T 84 0 1 1 82 0 0.9761904761904762 41.0 3.0 13.666666666666664 3.7725895038969273 13.666666666666664 0.1316978931253189 198.99551651235691 TTTGA GGGTTTGATGT 4 0.4318612061476973 1 True 42696266 ENST00000321358.12 482 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 86 0 0 84 0 2 0.9767441860465116 42.0 1.0 42.0 5.392317422778762 0.0 1.0 1511.0 TTGAT GGTTTGATGTT 0 0.996041695164794 1 True 42696267 ENST00000321358.12 483 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 85 84 0 0 0 1 0.9882352941176472 84.0 1.0 84.0 6.3923174227787625 0.0 1.0 1511.0 TGATG GTTTGATGTTG 0 0.9989708448810688 1 True 42696268 ENST00000321358.12 484 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 83 0 5 0 78 0 0.9397590361445785 15.6 1.0 15.6 3.963474123974886 0.0 1.0 1511.0 GATGT TTTGATGTTGT 0 0.9750028735489392 1 True 42696269 ENST00000321358.12 485 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 85 0 0 83 0 2 0.976470588235294 41.5 1.0 41.5 5.3750394313469245 0.0 1.0 1511.0 ATGTT TTGATGTTGTT 0 0.9959520445630764 1 42696270 ENST00000321358.12 486 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 83 0 4 0 79 0 0.9518072289156626 19.75 1.0 19.75 4.303780748177103 0.0 1.0 1511.0 TGTTG TGATGTTGTTG 0 0.9836839069226899 1 42696271 ENST00000321358.12 487 T 5 0 0 0 4 1 0.8 ENST00000321358.12 T 88 0 0 2 82 4 0.9318181818181818 13.666666666666664 4.0 3.4166666666666665 1.7725895038969277 3.4166666666666665 0.329893356683152 498.4688619482427 GTTGT GATGTTGTTGA 2 0.8092521260755351 1 42696272 ENST00000321358.12 488 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 85 0 0 84 0 1 0.9882352941176472 84.0 1.0 84.0 6.3923174227787625 0.0 1.0 1511.0 TTGTT ATGTTGTTGAG 0 0.9989708448810688 1 42696273 ENST00000321358.12 489 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 81 0 3 1 77 0 0.9506172839506172 19.25 1.0 19.25 4.266786540694901 0.0 1.0 1511.0 TGTTG TGTTGTTGAGG 0 0.9830598427905314 1 42696274 ENST00000321358.12 490 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 84 0 0 1 81 2 0.9642857142857144 27.0 1.0 27.0 4.754887502163468 0.0 1.0 1511.0 GTTGA GTTGTTGAGGA 0 0.9909572797148138 1 42696275 ENST00000321358.12 491 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 83 2 0 77 1 3 0.927710843373494 12.833333333333336 1.0 12.833333333333336 3.6818240399737454 0.0 1.0 1511.0 TTGAG TTGTTGAGGAA 1 0.9651020082706392 1 42696276 ENST00000321358.12 493 A 5 4 0 0 0 1 0.8 ENST00000321358.12 A 79 79 0 0 0 0 1.0 1.0 4.0 0.25 -2.0 inf 0.0595238095238096 89.9404761904763 TGAGG TGTTGAGGAAT 6 0.21106399605955065 1 42696277 ENST00000321358.12 495 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 82 1 0 81 0 0 0.9878048780487804 81.0 1.0 81.0 6.339850002884624 0.0 1.0 1511.0 GAGGA GTTGAGGAATC 0 0.9988970519396771 1 42696278 ENST00000321358.12 497 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 85 1 0 81 0 3 0.9529411764705882 20.25 1.0 20.25 4.3398500028846225 0.0 1.0 1511.0 AGGAA TTGAGGAATCG 0 0.9845302048639336 1 42696280 ENST00000321358.12 498 A 2 2 0 0 0 0 1.0 ENST00000321358.12 A 55 53 0 2 0 0 0.9636363636363636 26.5 1.0 26.5 4.7279204545632005 0.0 1.0 1511.0 GGAAT TGAGGAATCGG 0 0.9974895956942454 1 42696282 ENST00000321358.12 501 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 83 82 0 0 0 1 0.9879518072289156 82.0 1.0 82.0 6.357552004618085 0.0 1.0 1511.0 GAATC GAGGAATCGGA 0 0.9989225125935792 1 42696284 ENST00000321358.12 505 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 85 0 0 0 84 1 0.9882352941176472 84.0 1.0 84.0 6.3923174227787625 0.0 1.0 1511.0 AATCG AGGAATCGGAA 0 0.9989708448810694 1 42696285 ENST00000321358.12 507 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 86 0 82 0 0 4 0.9534883720930232 20.5 1.0 20.5 4.357552004618084 0.0 1.0 1511.0 ATCGG GGAATCGGAAG 0 0.9847358000909614 1 42696288 ENST00000321358.12 508 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 81 4 0 76 1 0 0.9382716049382716 15.2 1.0 15.2 3.925999418556223 0.0 1.0 1511.0 TCGGA GAATCGGAAGC 0 0.9740143840720028 1 42696645 ENST00000321358.12 509 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 86 0 0 81 0 5 0.9418604651162792 16.2 1.0 16.2 4.017921907997264 0.0 1.0 1511.0 CGGAA AATCGGAAGCA 0 0.9765980904118502 1 42696647 ENST00000321358.12 510 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 85 84 0 0 0 1 0.9882352941176472 84.0 1.0 84.0 6.3923174227787625 0.0 1.0 1511.0 GGAAG ATCGGAAGCAA 0 0.9989708448810688 1 42696648 ENST00000321358.12 514 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 84 83 0 1 0 0 0.988095238095238 83.0 1.0 83.0 6.3750394313469245 0.0 1.0 1511.0 GAAGC TCGGAAGCAAA 0 0.9989470969897936 1 True 42696649 ENST00000321358.12 515 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 84 1 0 83 0 0 0.988095238095238 83.0 1.0 83.0 6.3750394313469245 0.0 1.0 1511.0 AAGCA CGGAAGCAAAT 0 0.9989470969897938 1 True 42696650 ENST00000321358.12 516 C 5 0 4 0 0 1 0.8 ENST00000321358.12 C 90 0 83 0 1 6 0.9222222222222224 11.857142857142858 4.0 2.9642857142857144 1.5676845092893208 2.9642857142857144 0.3622794956324097 547.4043179005712 AGCAA GGAAGCAAATG 1 0.9122219585569646 1 True 42696654 ENST00000321358.12 517 A 3 2 1 0 0 0 0.6666666666666666 ENST00000321358.12 A 76 76 0 0 0 0 1.0 1.0 2.0 0.5 -1.0 inf 0.037974683544303736 57.37974683544297 GCAAA GAAGCAAATGT 7 0.14092793538657594 1 True 42696655 ENST00000321358.12 518 A 4 3 0 1 0 0 0.75 ENST00000321358.12 A 85 80 0 4 0 1 0.9411764705882352 16.0 3.0 5.333333333333333 2.4150374992788444 5.333333333333333 0.2473785911519613 373.7890512306134 CAAAT AAGCAAATGTT 2 0.7688471552178644 1 True 42696656 ENST00000321358.12 519 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 84 79 4 0 1 0 0.9404761904761904 15.8 1.0 15.8 3.9818526532897414 0.0 1.0 1511.0 AAATG AGCAAATGTTA 0 0.9757149235051358 1 True 42696657 ENST00000321358.12 520 T 5 0 0 0 4 1 0.8 ENST00000321358.12 T 88 0 1 1 81 5 0.9204545454545454 11.571428571428573 4.0 2.8928571428571432 1.5324950808270206 2.8928571428571432 0.3688530452480844 557.3369513698555 AATGT GCAAATGTTAC 1 0.8632524916723243 1 True 42696658 ENST00000321358.12 521 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 84 0 1 82 0 1 0.9761904761904762 41.0 1.0 41.0 5.357552004618084 0.0 1.0 1511.0 ATGTT CAAATGTTACA 0 0.9959289235924688 1 True 42696659 ENST00000321358.12 522 T 2 0 1 0 1 0 0.5 ENST00000321358.12 T 77 4 13 2 58 0 0.7532467532467533 3.0526315789473686 1.0 3.0526315789473686 1.6100534816839869 3.0526315789473686 0.4446608244076599 671.8825056799741 TGTTA AAATGTTACAT 1 0.8599114204168632 1 True 42696660 ENST00000321358.12 523 T 3 0 0 0 3 0 1.0 ENST00000321358.12 T 81 0 9 0 69 3 0.8518518518518519 5.75 1.0 5.75 2.523561956057013 0.0 1.0 1511.0 GTTAC AATGTTACATT 1 0.9186625376933386 1 42696661 ENST00000321358.12 524 A 2 2 0 0 0 0 1.0 ENST00000321358.12 A 64 62 1 0 1 0 0.96875 31.0 1.0 31.0 4.954196310386875 0.0 1.0 1511.0 TTACA ATGTTACATTG 0 0.9981791215142104 1 42696662 ENST00000321358.12 525 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 85 0 83 0 0 2 0.976470588235294 41.5 1.0 41.5 5.3750394313469245 0.0 1.0 1511.0 TACAT TGTTACATTGG 0 0.9959520445630764 1 42696663 ENST00000321358.12 526 A 4 3 0 1 0 0 0.75 ENST00000321358.12 A 84 80 1 2 0 1 0.9523809523809524 20.0 3.0 6.666666666666668 2.736965594166206 6.666666666666668 0.2119611130885244 320.2732418767604 ACATT GTTACATTGGG 3 0.5729105994346855 1 True 42696664 ENST00000321358.12 529 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 89 0 0 0 84 5 0.9438202247191012 16.8 1.0 16.8 4.070389327891398 0.0 1.0 1511.0 CATTG TTACATTGGGT 0 0.9780454247916636 1 True 42696665 ENST00000321358.12 532 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 84 1 1 0 82 0 0.9761904761904762 41.0 1.0 41.0 5.357552004618084 0.0 1.0 1511.0 ATTGG TACATTGGGTG 0 0.9959289235924704 1 True 42696666 ENST00000321358.12 533 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 82 0 0 81 1 0 0.9878048780487804 81.0 1.0 81.0 6.339850002884624 0.0 1.0 1511.0 TTGGG ACATTGGGTGT 0 0.9988970519396771 1 True 42696669 ENST00000321358.12 534 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 84 1 0 83 0 0 0.988095238095238 83.0 1.0 83.0 6.3750394313469245 0.0 1.0 1511.0 TGGGT CATTGGGTGTT 0 0.9989470969897938 1 True 42696672 ENST00000321358.12 536 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 85 0 0 84 0 1 0.9882352941176472 84.0 1.0 84.0 6.3923174227787625 0.0 1.0 1511.0 GGGTG ATTGGGTGTTG 0 0.9989708448810688 1 True 42696673 ENST00000321358.12 538 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 85 0 0 0 83 2 0.976470588235294 41.5 1.0 41.5 5.3750394313469245 0.0 1.0 1511.0 GGTGT TTGGGTGTTGT 0 0.9959520445630764 1 True 42696674 ENST00000321358.12 539 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 85 0 0 84 0 1 0.9882352941176472 84.0 1.0 84.0 6.3923174227787625 0.0 1.0 1511.0 GTGTT TGGGTGTTGTC 0 0.9989708448810688 1 True 42696676 ENST00000321358.12 540 T 3 0 0 0 3 0 1.0 ENST00000321358.12 T 83 0 1 0 82 0 0.9879518072289156 82.0 1.0 82.0 6.357552004618085 0.0 1.0 1511.0 TGTTG GGGTGTTGTCA 0 0.9993799746914368 1 True 42696678 ENST00000321358.12 541 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 84 1 0 0 83 0 0.988095238095238 83.0 1.0 83.0 6.3750394313469245 0.0 1.0 1511.0 GTTGT GGTGTTGTCAG 0 0.9989470969897938 1 42696679 ENST00000321358.12 545 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 84 0 0 83 0 1 0.988095238095238 83.0 1.0 83.0 6.3750394313469245 0.0 1.0 1511.0 TTGTC GTGTTGTCAGG 0 0.9989470969897928 1 42696680 ENST00000321358.12 547 T 5 0 0 0 4 1 0.8 ENST00000321358.12 T 87 0 1 0 83 3 0.9540229885057472 20.75 4.0 5.1875 2.3750394313469245 5.1875 0.24863735434082235 375.69104240898247 TGTCA TGTTGTCAGGC 2 0.7546811021759168 1 42696681 ENST00000321358.12 548 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 83 1 82 0 0 0 0.9879518072289156 82.0 1.0 82.0 6.357552004618085 0.0 1.0 1511.0 GTCAG GTTGTCAGGCA 0 0.9989225125935794 1 42696685 ENST00000321358.12 550 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 83 80 1 2 0 0 0.9638554216867472 26.66666666666667 1.0 26.66666666666667 4.736965594166207 0.0 1.0 1511.0 TCAGG TTGTCAGGCAG 0 0.9907484132908744 1 42696687 ENST00000321358.12 551 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 83 1 0 82 0 0 0.9879518072289156 82.0 1.0 82.0 6.357552004618085 0.0 1.0 1511.0 CAGGC TGTCAGGCAGT 0 0.9989225125935794 1 42696688 ENST00000321358.12 552 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 85 0 0 84 0 1 0.9882352941176472 84.0 1.0 84.0 6.3923174227787625 0.0 1.0 1511.0 AGGCA GTCAGGCAGTA 0 0.9989708448810688 1 42696690 ENST00000321358.12 553 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 86 1 83 0 0 2 0.9651162790697676 27.66666666666667 1.0 27.66666666666667 4.7900769306257684 0.0 1.0 1511.0 GGCAG TCAGGCAGTAA 0 0.9913544014020392 1 42696691 ENST00000321358.12 554 A 4 2 0 2 0 0 0.5 ENST00000321358.12 A 84 70 0 13 1 0 0.8333333333333334 5.0 1.0 5.0 2.3219280948873617 5.0 0.14960396931244593 226.0515976311058 GCAGT CAGGCAGTAAA 2 0.6473692670751166 1 True 42696692 ENST00000321358.12 555 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 85 0 0 84 0 1 0.9882352941176472 84.0 1.0 84.0 6.3923174227787625 0.0 1.0 1511.0 CAGTA AGGCAGTAAAT 0 0.9989708448810688 1 True 42696693 ENST00000321358.12 556 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 85 0 0 0 84 1 0.9882352941176472 84.0 1.0 84.0 6.3923174227787625 0.0 1.0 1511.0 AGTAA GGCAGTAAATC 0 0.9989708448810694 1 True 42696694 ENST00000321358.12 558 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 85 82 0 2 0 1 0.9647058823529412 27.33333333333333 1.0 27.33333333333333 4.772589503896928 0.0 1.0 1511.0 GTAAA GCAGTAAATCA 0 0.991159173599826 1 True 42696695 ENST00000321358.12 559 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 82 80 2 0 0 0 0.975609756097561 40.0 1.0 40.0 5.321928094887364 0.0 1.0 1511.0 TAAAT CAGTAAATCAG 0 0.9956639835281412 1 True 42696696 ENST00000321358.12 561 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 86 84 0 0 0 2 0.9767441860465116 42.0 1.0 42.0 5.392317422778762 0.0 1.0 1511.0 AAATC AGTAAATCAGC 0 0.996041695164794 1 True 42696698 ENST00000321358.12 562 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 83 0 2 0 81 0 0.9759036144578314 40.5 1.0 40.5 5.339850002884624 0.0 1.0 1511.0 AATCA GTAAATCAGCG 0 0.9957633363675524 1 True 42696699 ENST00000321358.12 564 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 87 0 80 0 2 5 0.9195402298850576 11.428571428571427 1.0 11.428571428571427 3.5145731728297585 0.0 1.0 1511.0 ATCAG TAAATCAGCGA 1 0.9570106491317908 1 True 42696701 ENST00000321358.12 565 A 4 3 0 1 0 0 0.75 ENST00000321358.12 A 82 72 0 6 4 0 0.8780487804878049 7.2 3.0 2.4 1.263034405833794 2.4 0.4276343207498742 646.1554586530599 TCAGC AAATCAGCGAC 1 0.8405092840565379 1 True 42696702 ENST00000321358.12 566 G 3 0 0 3 0 0 1.0 ENST00000321358.12 G 82 7 0 75 0 0 0.9146341463414634 10.714285714285714 1.0 10.714285714285714 3.4214637684382767 0.0 1.0 1511.0 CAGCG AATCAGCGACC 1 0.9710391100837542 1 42696704 ENST00000321358.12 567 C 4 1 3 0 0 0 0.75 ENST00000321358.12 C 81 9 71 0 1 0 0.8765432098765432 7.1 3.0 2.3666666666666667 1.2428565238961635 2.3666666666666667 0.4317292947152411 652.3429643147292 AGCGA ATCAGCGACCG 1 0.9576096631393044 1 42696705 ENST00000321358.12 569 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 85 0 0 83 1 1 0.976470588235294 41.5 1.0 41.5 5.3750394313469245 0.0 1.0 1511.0 GCGAC TCAGCGACCGT 0 0.9960209202721676 1 42696706 ENST00000321358.12 570 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 85 82 0 1 1 1 0.9647058823529412 27.33333333333333 1.0 27.33333333333333 4.772589503896928 0.0 1.0 1511.0 CGACC CAGCGACCGTA 0 0.9912579876116594 1 42696707 ENST00000321358.12 571 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 88 1 81 0 0 6 0.9204545454545454 11.571428571428573 1.0 11.571428571428573 3.5324950808270215 0.0 1.0 1511.0 GACCG AGCGACCGTAA 0 0.9748077571376094 1 42696709 ENST00000321358.12 572 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 80 0 71 1 8 0 0.8875 7.8888888888888875 1.0 7.8888888888888875 2.9798221180623696 0.0 1.0 1511.0 ACCGT GCGACCGTAAC 1 0.9205555399645214 1 42696710 ENST00000321358.12 573 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 82 4 0 75 1 2 0.9146341463414634 10.714285714285714 1.0 10.714285714285714 3.4214637684382767 0.0 1.0 1511.0 CCGTA CGACCGTAACC 1 0.9523265796138632 1 42696711 ENST00000321358.12 574 T 4 0 1 0 3 0 0.75 ENST00000321358.12 T 80 0 3 0 77 0 0.9625 25.66666666666667 3.0 8.555555555555555 3.096861539252589 8.555555555555555 0.1803165688952735 272.45833560075835 CGTAA GACCGTAACCA 2 0.7213423737954345 1 42696712 ENST00000321358.12 575 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 81 79 0 1 0 1 0.9753086419753086 39.5 1.0 39.5 5.303780748177103 0.0 1.0 1511.0 GTAAC ACCGTAACCAT 0 0.9956330280421248 1 42696713 ENST00000321358.12 576 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 84 83 0 0 1 0 0.988095238095238 83.0 1.0 83.0 6.3750394313469245 0.0 1.0 1511.0 TAACC CCGTAACCATT 0 0.9989470969897936 1 42696714 ENST00000321358.12 577 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 85 0 80 0 4 1 0.9411764705882352 16.0 1.0 16.0 4.0 0.0 1.0 1511.0 AACCA CGTAACCATTA 0 0.9762449224473799 1 42696715 ENST00000321358.12 578 C 5 0 4 0 0 1 0.8 ENST00000321358.12 C 83 1 81 0 0 1 0.9759036144578314 40.5 4.0 10.125 3.3398500028846247 10.125 0.16270868265655786 245.8528194940589 ACCAT GTAACCATTAT 3 0.5000582015379134 1 42696716 ENST00000321358.12 579 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 80 79 0 1 0 0 0.9875 79.0 1.0 79.0 6.303780748177103 0.0 1.0 1511.0 CCATT TAACCATTATA 0 0.9988433307276868 1 42696717 ENST00000321358.12 580 T 4 0 1 0 3 0 0.75 ENST00000321358.12 T 78 0 3 0 75 0 0.9615384615384616 25.0 3.0 8.333333333333334 3.0588936890535687 8.333333333333334 0.1844619395561045 278.7219906692739 CATTA AACCATTATAG 2 0.7291985007534868 1 42696718 ENST00000321358.12 581 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 80 1 0 0 79 0 0.9875 79.0 1.0 79.0 6.303780748177103 0.0 1.0 1511.0 ATTAT ACCATTATAGA 0 0.9988433307276868 1 42696719 ENST00000321358.12 582 A 4 3 0 1 0 0 0.75 ENST00000321358.12 A 86 79 0 3 0 4 0.9186046511627908 11.285714285714285 3.0 3.7619047619047614 1.9114633253983428 3.761904761904762 0.3154873023141138 476.701313796626 TTATA CCATTATAGAC 2 0.6463448967791191 1 42696720 ENST00000321358.12 583 T 4 0 1 0 3 0 0.75 ENST00000321358.12 T 81 0 3 0 78 0 0.9629629629629628 26.0 3.0 8.666666666666666 3.115477217419936 8.666666666666666 0.17831275913245093 269.43057904913337 TATAG CATTATAGACG 2 0.7174765396651879 1 42696721 ENST00000321358.12 584 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 84 80 0 3 1 0 0.9523809523809524 20.0 1.0 20.0 4.321928094887364 0.0 1.0 1511.0 ATAGA ATTATAGACGC 0 0.9841810460330894 1 42696722 ENST00000321358.12 585 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 85 1 0 83 0 1 0.976470588235294 41.5 1.0 41.5 5.3750394313469245 0.0 1.0 1511.0 TAGAC TTATAGACGCA 0 0.9960209202721676 1 42696723 ENST00000321358.12 586 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 84 83 0 1 0 0 0.988095238095238 83.0 1.0 83.0 6.3750394313469245 0.0 1.0 1511.0 AGACG TATAGACGCAT 0 0.9989470969897936 1 42696724 ENST00000321358.12 587 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 85 0 79 0 5 1 0.9294117647058824 13.166666666666664 1.0 13.166666666666664 3.7188182474559466 0.0 1.0 1511.0 GACGC ATAGACGCATC 1 0.9664111899138362 1 42696725 ENST00000321358.12 588 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 84 0 0 83 0 1 0.988095238095238 83.0 1.0 83.0 6.3750394313469245 0.0 1.0 1511.0 ACGCA TAGACGCATCC 0 0.9989470969897928 1 42696726 ENST00000321358.12 589 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 81 1 66 0 14 0 0.8148148148148148 4.4 1.0 4.4 2.137503523749935 0.0 1.0 1511.0 CGCAT AGACGCATCCA 2 0.8101681324029825 1 42696727 ENST00000321358.12 591 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 82 81 0 0 1 0 0.9878048780487804 81.0 1.0 81.0 6.339850002884624 0.0 1.0 1511.0 GCATC GACGCATCCAC 0 0.9988970519396771 1 42696728 ENST00000321358.12 592 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 82 1 0 2 79 0 0.9634146341463414 26.33333333333333 1.0 26.33333333333333 4.718818247455947 0.0 1.0 1511.0 CATCC ACGCATCCACG 0 0.9905322500758266 1 42696729 ENST00000321358.12 593 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 83 1 82 0 0 0 0.9879518072289156 82.0 1.0 82.0 6.357552004618085 0.0 1.0 1511.0 ATCCA CGCATCCACGT 0 0.9989225125935794 1 42696731 ENST00000321358.12 594 C 2 0 2 0 0 0 1.0 ENST00000321358.12 C 70 1 69 0 0 0 0.9857142857142858 69.0 1.0 69.0 6.108524456778167 0.0 1.0 1511.0 TCCAC GCATCCACGTC 0 0.9996049351179076 1 42696732 ENST00000321358.12 595 A 2 2 0 0 0 0 1.0 ENST00000321358.12 A 67 64 1 2 0 0 0.9552238805970148 21.33333333333333 1.0 21.33333333333333 4.415037499278844 0.0 1.0 1511.0 CCACG CATCCACGTCG 0 0.9962438962077124 1 42696733 ENST00000321358.12 596 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 77 0 74 0 3 0 0.9610389610389608 24.66666666666667 1.0 24.66666666666667 4.624490864907794 0.0 1.0 1511.0 CACGT ATCCACGTCGT 0 0.9936988126491058 1 42696734 ENST00000321358.12 597 G 4 1 0 3 0 0 0.75 ENST00000321358.12 G 74 2 1 71 0 0 0.9594594594594594 23.66666666666667 3.0 7.8888888888888875 2.9798221180623696 7.8888888888888875 0.1933498080866507 292.15156001892916 ACGTC TCCACGTCGTA 3 0.6223492796607522 1 42696735 ENST00000321358.12 598 T 4 0 1 0 3 0 0.75 ENST00000321358.12 T 83 0 3 1 77 2 0.927710843373494 12.833333333333336 3.0 4.2777777777777795 2.096861539252589 4.2777777777777795 0.28946333946569824 437.37910593267 CGTCG CCACGTCGTAG 2 0.6694615895013591 1 42696736 ENST00000321358.12 599 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 73 0 55 0 18 0 0.7534246575342466 3.0555555555555562 1.0 3.0555555555555562 1.6114347120823471 0.0 1.0 1511.0 GTCGT CACGTCGTAGG 2 0.7981858202344738 1 42696737 ENST00000321358.12 600 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 83 1 0 82 0 0 0.9879518072289156 82.0 1.0 82.0 6.357552004618085 0.0 1.0 1511.0 TCGTA ACGTCGTAGGG 0 0.9989225125935794 1 True 42696738 ENST00000321358.12 601 T 4 0 1 0 3 0 0.75 ENST00000321358.12 T 80 1 9 1 69 0 0.8625 6.2727272727272725 3.0 2.090909090909091 1.0641303374197155 2.090909090909091 0.4668103307539088 705.3504097691562 CGTAG CGTCGTAGGGG 1 0.9492321307817548 1 True 42696739 ENST00000321358.12 602 A 3 2 0 1 0 0 0.6666666666666666 ENST00000321358.12 A 70 54 2 12 2 0 0.7714285714285715 3.375 2.0 1.6875 0.7548875021634686 1.6875 0.5543121744163613 837.5656955431219 GTAGG GTCGTAGGGGC 1 0.9493527117098974 1 True 42696740 ENST00000321358.12 603 G 3 0 0 2 1 0 0.6666666666666666 ENST00000321358.12 G 58 3 0 54 1 0 0.9310344827586208 13.5 2.0 6.75 2.7548875021634687 6.75 0.2297860516810225 347.20672409002503 TAGGG TCGTAGGGGCC 4 0.4206182045328415 1 True 42696741 ENST00000321358.12 604 G 5 0 0 4 0 1 0.8 ENST00000321358.12 G 82 5 0 76 0 1 0.9268292682926828 12.666666666666664 4.0 3.1666666666666665 1.6629650127224291 3.1666666666666665 0.3493881180649775 527.9254463961811 AGGGG CGTAGGGGCCT 4 0.4429882855945365 1 True 42696742 ENST00000321358.12 605 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 86 0 1 84 1 0 0.9767441860465116 42.0 1.0 42.0 5.392317422778762 0.0 1.0 1511.0 GGGGC GTAGGGGCCTC 0 0.9961098446500906 1 True 42696743 ENST00000321358.12 606 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 81 0 1 80 0 0 0.9876543209876544 80.0 1.0 80.0 6.321928094887363 0.0 1.0 1511.0 GGGCC TAGGGGCCTCC 0 0.9988706728861868 1 True 42696744 ENST00000321358.12 608 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 66 0 65 1 0 0 0.9848484848484848 65.0 1.0 65.0 6.0223678130284535 0.0 1.0 1511.0 GGCCT AGGGGCCTCCA 0 0.9983262858946022 1 True 42696745 ENST00000321358.12 609 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 69 0 66 2 0 1 0.9565217391304348 22.0 1.0 22.0 4.459431618637297 0.0 1.0 1511.0 GCCTC GGGGCCTCCAC 0 0.9868689252173476 1 True 42696746 ENST00000321358.12 610 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 85 7 0 0 78 0 0.9176470588235294 11.142857142857142 1.0 11.142857142857142 3.478047296804643 0.0 1.0 1511.0 CCTCC GGGCCTCCACC 1 0.9549251690139422 1 True 42696748 ENST00000321358.12 611 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 83 0 82 0 1 0 0.9879518072289156 82.0 1.0 82.0 6.357552004618085 0.0 1.0 1511.0 CTCCA GGCCTCCACCA 0 0.9989225125935794 1 42696749 ENST00000321358.12 612 C 3 0 3 0 0 0 1.0 ENST00000321358.12 C 85 0 84 1 0 0 0.9882352941176472 84.0 1.0 84.0 6.3923174227787625 0.0 1.0 1511.0 TCCAC GCCTCCACCAA 0 0.9994079230023684 1 42696750 ENST00000321358.12 613 A 3 3 0 0 0 0 1.0 ENST00000321358.12 A 83 82 1 0 0 0 0.9879518072289156 82.0 1.0 82.0 6.357552004618085 0.0 1.0 1511.0 CCACC CCTCCACCAAT 0 0.9993799746914368 1 42696751 ENST00000321358.12 614 C 4 0 4 0 0 0 1.0 ENST00000321358.12 C 85 0 84 0 1 0 0.9882352941176472 84.0 1.0 84.0 6.3923174227787625 0.0 1.0 1511.0 CACCA CTCCACCAATT 0 0.9989708448810694 1 42696752 ENST00000321358.12 616 C 4 0 3 0 1 0 0.75 ENST00000321358.12 C 83 1 78 0 4 0 0.9397590361445785 15.6 3.0 5.2 2.37851162325373 5.2 0.2525523441132668 381.6065919551462 ACCAA TCCACCAATTA 2 0.7756184680642695 1 42696753 ENST00000321358.12 617 A 4 3 0 1 0 0 0.75 ENST00000321358.12 A 79 76 0 2 1 0 0.9620253164556962 25.33333333333333 3.0 8.444444444444445 3.078002512001273 8.444444444444445 0.18236577747303606 275.55468976175763 CCAAT CCACCAATTAC 3 0.6031104195853765 1 42696754 ENST00000321358.12 618 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 85 80 0 4 0 1 0.9411764705882352 16.0 1.0 16.0 4.0 0.0 1.0 1511.0 CAATT CACCAATTACA 0 0.9762449224473799 1 42696756 ENST00000321358.12 619 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 80 0 2 0 78 0 0.975 39.0 1.0 39.0 5.28540221886225 0.0 1.0 1511.0 AATTA ACCAATTACAC 0 0.9954544754459264 1 42696757 ENST00000321358.12 620 T 4 0 0 0 4 0 1.0 ENST00000321358.12 T 81 0 2 0 79 0 0.9753086419753086 39.5 1.0 39.5 5.303780748177103 0.0 1.0 1511.0 ATTAC CCAATTACACA 0 0.995561086729377 1 42696758 ENST00000321358.12 621 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 87 86 0 0 0 1 0.9885057471264368 86.0 1.0 86.0 6.426264754702097 0.0 1.0 1511.0 TTACA CAATTACACAA 0 0.9990159791656842 1 42696759 ENST00000321358.12 623 C 5 0 4 0 0 1 0.8 ENST00000321358.12 C 88 0 86 0 0 2 0.9772727272727272 43.0 4.0 10.75 3.4262647547020983 10.75 0.1543547616478895 233.23004484996102 TACAC AATTACACAAA 2 0.6604477206852581 1 True 42696760 ENST00000321358.12 624 A 4 3 0 1 0 0 0.75 ENST00000321358.12 A 86 85 0 0 1 0 0.9883720930232558 85.0 3.0 28.33333333333333 4.824428435416546 28.33333333333333 0.08739076154806492 132.0474406991261 ACACA ATTACACAAAA 7 0.1612949946034382 1 True 42696761 ENST00000321358.12 626 C 5 0 4 0 0 1 0.8 ENST00000321358.12 C 86 0 85 0 0 1 0.9883720930232558 85.0 4.0 21.25 4.409390936137702 21.25 0.10744810744810727 162.3540903540901 CACAA TTACACAAAAT 3 0.5047500616929974 1 True 42696763 ENST00000321358.12 627 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 76 75 0 0 1 0 0.986842105263158 75.0 1.0 75.0 6.22881869049588 0.0 1.0 1511.0 ACAAA TACACAAAATT 0 0.9987233361298606 1 True 42696764 ENST00000321358.12 628 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 87 86 0 0 0 1 0.9885057471264368 86.0 1.0 86.0 6.426264754702097 0.0 1.0 1511.0 CAAAA ACACAAAATTA 0 0.9990159791656842 1 True 42696766 ENST00000321358.12 629 A 5 5 0 0 0 0 1.0 ENST00000321358.12 A 86 85 0 0 1 0 0.9883720930232558 85.0 1.0 85.0 6.409390936137703 0.0 1.0 1511.0 AAAAT CACAAAATTAC 0 0.9984587513753604 1 True 42696767 ENST00000321358.12 630 A 5 5 0 0 0 0 1.0 ENST00000321358.12 A 88 85 0 0 0 3 0.9659090909090908 28.33333333333333 1.0 28.33333333333333 4.824428435416546 0.0 1.0 1511.0 AAATT ACAAAATTACA 0 0.9873393580628864 1 True 42696768 ENST00000321358.12 631 T 5 0 0 0 5 0 1.0 ENST00000321358.12 T 82 0 3 0 79 0 0.9634146341463414 26.33333333333333 1.0 26.33333333333333 4.718818247455947 0.0 1.0 1511.0 AATTA CAAAATTACAG 0 0.9855570231816592 1 True 42696769 ENST00000321358.12 632 T 5 0 0 0 5 0 1.0 ENST00000321358.12 T 83 0 2 0 81 0 0.9759036144578314 40.5 1.0 40.5 5.339850002884624 0.0 1.0 1511.0 ATTAC AAAATTACAGA 0 0.9935578097903176 1 True 42696770 ENST00000321358.12 633 A 5 5 0 0 0 0 1.0 ENST00000321358.12 A 87 84 0 0 2 1 0.9655172413793104 28.0 1.0 28.0 4.807354922057604 0.0 1.0 1511.0 TTACA AAATTACAGAA 0 0.9871874288067192 1 True 42696771 ENST00000321358.12 635 C 5 0 5 0 0 0 1.0 ENST00000321358.12 C 89 0 85 1 0 3 0.9550561797752808 21.25 1.0 21.25 4.409390936137702 0.0 1.0 1511.0 TACAG AATTACAGAAT 0 0.9786626494258324 1 42696772 ENST00000321358.12 636 A 5 4 0 1 0 0 0.8 ENST00000321358.12 A 87 84 0 1 0 2 0.9655172413793104 28.0 4.0 7.0 2.807354922057604 7.0 0.2033745443613542 307.29893653000624 ACAGA ATTACAGAATA 4 0.4734145657750195 1 42696773 ENST00000321358.12 637 G 5 0 0 5 0 0 1.0 ENST00000321358.12 G 93 0 0 85 0 8 0.913978494623656 10.625 1.0 10.625 3.4093909361377017 0.0 1.0 1511.0 CAGAA TTACAGAATAG 1 0.9282305819058456 1 42696775 ENST00000321358.12 638 A 5 5 0 0 0 0 1.0 ENST00000321358.12 A 87 86 0 0 0 1 0.9885057471264368 86.0 1.0 86.0 6.426264754702097 0.0 1.0 1511.0 AGAAT TACAGAATAGT 0 0.9984925074787075 1 42696776 ENST00000321358.12 639 A 5 5 0 0 0 0 1.0 ENST00000321358.12 A 89 86 0 0 0 3 0.9662921348314608 28.66666666666667 1.0 28.66666666666667 4.841302253980941 0.0 1.0 1511.0 GAATA ACAGAATAGTG 0 0.9876040953131914 1 42696777 ENST00000321358.12 640 T 5 0 0 0 5 0 1.0 ENST00000321358.12 T 86 1 0 1 84 0 0.9767441860465116 42.0 1.0 42.0 5.392317422778762 0.0 1.0 1511.0 AATAG CAGAATAGTGA 0 0.9940590780577268 1 42696778 ENST00000321358.12 641 A 5 2 0 3 0 0 0.4 ENST00000321358.12 A 87 76 0 10 0 1 0.8735632183908046 6.909090909090909 1.5 4.606060606060606 2.2035333940851323 4.606060606060606 0.14452043641100729 218.370379417032 ATAGT AGAATAGTGAG 6 0.18483784252063126 1 42696779 ENST00000321358.12 642 G 5 0 0 5 0 0 1.0 ENST00000321358.12 G 88 1 0 84 1 2 0.9545454545454546 21.0 1.0 21.0 4.392317422778762 0.0 1.0 1511.0 TAGTG GAATAGTGAGG 0 0.9783633173725468 1 42696780 ENST00000321358.12 643 T 5 0 0 0 5 0 1.0 ENST00000321358.12 T 85 1 0 1 83 0 0.976470588235294 41.5 1.0 41.5 5.3750394313469245 0.0 1.0 1511.0 AGTGA AATAGTGAGGT 0 0.9939251680957719 1 42696781 ENST00000321358.12 644 G 4 0 0 4 0 0 1.0 ENST00000321358.12 G 83 2 0 80 0 1 0.9638554216867472 26.66666666666667 1.0 26.66666666666667 4.736965594166207 0.0 1.0 1511.0 GTGAG ATAGTGAGGTG 0 0.9907484132908724 1 42696782 ENST00000321358.12 645 A 4 4 0 0 0 0 1.0 ENST00000321358.12 A 82 81 0 0 1 0 0.9878048780487804 81.0 1.0 81.0 6.339850002884624 0.0 1.0 1511.0 TGAGG TAGTGAGGTGG 0 0.9988970519396771 1 42696783 ENST00000321358.12 646 G 5 0 0 5 0 0 1.0 ENST00000321358.12 G 88 0 0 86 0 2 0.9772727272727272 43.0 1.0 43.0 5.426264754702097 0.0 1.0 1511.0 GAGGT AGTGAGGTGGG 0 0.9942326494680678 1 True 42696784 ENST00000321358.12 648 G 5 0 0 5 0 0 1.0 ENST00000321358.12 G 87 1 0 85 0 1 0.9770114942528736 42.5 1.0 42.5 5.4093909361377035 0.0 1.0 1511.0 AGGTG GTGAGGTGGGG 0 0.9941886240726836 1 True 42696785 ENST00000321358.12 649 T 5 0 0 0 5 0 1.0 ENST00000321358.12 T 87 4 0 0 82 1 0.9425287356321842 16.4 1.0 16.4 4.035623909730721 0.0 1.0 1511.0 GGTGG TGAGGTGGGGA 1 0.9660736774968598 1 True 42696786 ENST00000321358.12 650 G 5 0 0 5 0 0 1.0 ENST00000321358.12 G 51 6 0 44 1 0 0.8627450980392157 6.285714285714287 1.0 6.285714285714287 2.652076696579693 0.0 1.0 1511.0 GTGGG GAGGTGGGGAA 1 0.8441174102461146 1 True 42696788 ENST00000321358.12 651 G 5 0 0 5 0 0 1.0 ENST00000321358.12 G 86 8 0 76 0 2 0.8837209302325582 7.6 1.0 7.6 2.925999418556223 0.0 1.0 1511.0 TGGGG AGGTGGGGAAA 1 0.8786662393466366 1 True 42696789 ENST00000321358.12 652 G 5 0 0 5 0 0 1.0 ENST00000321358.12 G 84 2 0 82 0 0 0.9761904761904762 41.0 1.0 41.0 5.357552004618084 0.0 1.0 1511.0 GGGGA GGTGGGGAAAC 0 0.9937019482405324 1 True 42696790 ENST00000321358.12 653 G 3 1 0 2 0 0 0.6666666666666666 ENST00000321358.12 G 72 5 0 67 0 0 0.9305555555555556 13.4 2.0 6.7 2.7441610955704103 6.7 0.22407997038134034 338.58483524620533 GGGAA GTGGGGAAACG 2 0.7942179416836688 1 True 42696791 ENST00000321358.12 654 A 2 2 0 0 0 0 1.0 ENST00000321358.12 A 65 62 0 3 0 0 0.953846153846154 20.666666666666668 1.0 20.666666666666668 4.369233809665719 0.0 1.0 1511.0 GGAAA TGGGGAAACGA 0 0.9959417482114628 1 True 42696792 ENST00000321358.12 657 A 5 4 0 1 0 0 0.8 ENST00000321358.12 A 86 86 0 0 0 0 1.0 1.0 4.0 0.25 -2.0 inf 0.05494505494505497 83.02197802197806 GAAAC GGGGAAACGAG 6 0.19873213056445246 1 True 42696793 ENST00000321358.12 660 A 5 4 0 0 1 0 0.8 ENST00000321358.12 A 87 84 1 0 1 1 0.9655172413793104 28.0 4.0 7.0 2.807354922057604 7.0 0.2033745443613542 307.29893653000624 AAACG GGGAAACGAGG 4 0.4736620006803559 1 True 42696794

DepledgeLab commented 3 years ago

The column titled candidate_site indicates which (if any) positions are considered to be a putative RNA modification. This would be indicated by the inclusion of candidate or candidate_masked. Note that a candidate site by default is identified if the following conditions are met.

1: G-test padj value < 0.05 2: Odds ratio padj value < 0.05 3: Odds ratio > 1.5

While it is hard to make sense of the data you pasted, it looks to me as if you have very low coverage across most of the transcript. While we are working to define the lower bound of function for DRUMMER, we estimate that the minimum read depth should exceed 50 in both conditions (test vs control) in order to detect an abundant modification. In reality, we generally only consider transcripts with read coverage exceeding 250 in our analyses.

Side note: next time please just attach one of the output files rather than pasting it

aman21392 commented 3 years ago

E3.10K.complete.txt E3.RIDa.complete.txt These are the file which present in outputdir_isoform example data. I just go through your example data outputdir_isoform. In the candidate_site column i didn't see anything in that column. So in your file can you tell me how you reach the m6A modification.