Extracting k-mers from a database

DerrickWood / kraken2

The second version of the Kraken taxonomic sequence classification system

MIT License

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Open rjclifford opened 3 years ago

rjclifford commented 3 years ago

Hi, Is it possible to extract the k-mer and/or minimizer sequences assigned to a specific taxon from a Kraken2 database file? Thanks, -Bob

arcaea-ed commented 2 years ago

also wondering if this is possible. would be very valuable for us to have this functionality for a number of applications