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DerrickWood / kraken2

The second version of the Kraken taxonomic sequence classification system
MIT License
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kraken-filter #491

Open andrewjmc opened 2 years ago

andrewjmc commented 2 years ago

Hello,

Is there any way to use kraken-filter from kraken 1 with kraken 2? This could allow quicker/less resource intensive experimentation with different confidence thresholds without having to rerun searches.

I tried, but it cannot find the expected database.kdb file, even if I make a symbolic link to database.kraken (so I guess the format has changed).

Thanks,

Andrew

kmmehjabin commented 3 months ago

hi, were you able to get the .kdb file later? If yes, can you please say how?