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DerrickWood / kraken2

The second version of the Kraken taxonomic sequence classification system
MIT License
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Build the database unexpectedly interrupted after I downloaded the library and taxonomy customly #549

Open DooYal opened 2 years ago

DooYal commented 2 years ago

In the output log file: Creating sequence ID to taxonomy ID map (step 1)... Sequence ID to taxonomy ID map complete. [0.233s] Estimating required capacity (step 2)... Estimated hash table requirement: 9975531520 bytes Capacity estimation complete. [11m16.110s] Building database files (step 3)... build_db: OMP only wants you to use 1 threads xargs: cat: terminated by signal 13 Command exited with non-zero status 64

DooYal commented 2 years ago

By the way, the latest version of many Kraken2 databases were released 2 years ago, so when will they be updated?

LynnLy commented 2 years ago

You can find a bunch of indexes updated in 2021 here: https://benlangmead.github.io/aws-indexes/k2

DooYal commented 2 years ago

You can find a bunch of indexes updated in 2021 here: https://benlangmead.github.io/aws-indexes/k2

Thanks a lot. It's a very excellent project.