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DerrickWood / kraken2

The second version of the Kraken taxonomic sequence classification system
MIT License
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Segmentation fault when trying to run Kraken2 on MacOS M2 Pro #747

Open RicardoRH96 opened 11 months ago

RicardoRH96 commented 11 months ago

Hi, I installed kraken2 using Homebrew (the conda installation does not work for ARM apparently) and after downloading pre-build viral_db I tried to test the installation by running kraken2 on a Coronaviridae meta-transcriptomic SRA using the following command: kraken2 --db viral_db --report SRR25514890.fastq.k2report --report-minimizer-data --minimum-hit-groups 3 /cleaned_fastq/SRR25514890_1.fastq /cleaned_fastq/SRR25514890_2.fastq > SRR25514890.fastq.kraken2

But got the following output:

Loading database information... done. zsh: segmentation fault kraken2 --db viral_db --report SRR25514890.fastq.k2report 3 >

How could I fix this?