unexpected FTP path while building kraken2 standard database

[yashvagal]

When running the standard build command "kraken2-build --standard --db $DB_NAME" , I keep getting this error: rsync_from_ncbi.pl: unexpected FTP path (new server?) for https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/458/655/GCF_001458655.1_Mb9

I've tried many of the older fixes (Issue #525) for similar issues but I have not come across a solution that works.

[jenniferlu717]

Which version of kraken2 are you running?

[DCossey]

I am also having this issue. I looked at previous suggestions, but my script has ftp|https in it already so i assume i do not need to edit this.

[Mayfm]

Hello, I am facing this problem right now. Last year I did it in the same way and everything was running smoothly.

rsync_from_ncbi.pl: unexpected FTP path (new server?) for https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/900/128/725/GCF_900128725.1_BCifornacula_v1.0 rsync_from_ncbi.pl: unexpected FTP path (new server?) for

[Mayfm]

This is my code: kraken2-build --download-library bacteria --threads 20 --db database kraken2-build --download-library viral --threads 20 --db database kraken2-build --download-library fungi --threads 20 --db database

[Enkabloza]

@Mayfm Same problem I tried to modify line 46 of rsync and it didn't work

@jenniferlu717 any suggestion? help plzz