DessimozLab / OMArk

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DB file is not well formated #11

Closed arnkress closed 1 year ago

arnkress commented 1 year ago

Greetings, I am trying to run OMArk (version 0.2.3) on a proteome, but get stuck with this error message:

$ omark -d OMAmerDB -o out -f proteome.fasta
ERROR: The input OMAmer file is not well formated. Check that your OMAmer version is >=2.2.
ERROR: Exiting because one or more parameters are incorrect

I downloaded and gunzipped the OMAmerDB file from Zenodo (https://doi.org/10.5281/zenodo.7359861).

Am I missing something ? Cheers

arnkress commented 1 year ago

My bad, I had to use omamer before omark.