DessimozLab / pyham

MIT License
9 stars 5 forks source link

How to get all HOGs for a group of species? #4

Closed olgabot closed 1 year ago

olgabot commented 4 years ago

Hello, Thank you for making this! Really helps with dealing with OMA output. My question is, I'm analyzing RNA-seq data across mouse, mouse lemur, and human. As far as I can tell, these species are in the OMA database. How do I pull out the HOGs and their corresponding gene symbols/gene ids that I can then use to collapse in my dataset? Thank you! Warmest, Olga