DessimozLab / read2tree

a tool for inferring species tree from sequencing reads
MIT License
138 stars 18 forks source link

Trouble in downloading OMA database #56

Closed xuliuouc closed 6 months ago

xuliuouc commented 6 months ago

Hi,

Thank you for your great work on this amazing software. I'm having trouble downloading marker genes through the OMA database (https://omabrowser.org/oma/export_markers). When I chose the species I wanted and hit the 'submit' button, the browser opened another OMA tag (https://omabrowser.org/oma/export_markers) but didn't start downloading any data (waited for long enough). I've tried every device I have, including Win11 and Win10 with MS Edge and Chrome, Andriod, MacBook with Chrome and Safari, and Ubuntu with Firefox, but none of them worked. Could you please tell me where possible went wrong?

Thank you in advance.

alpae commented 6 months ago

Hi @xuliuouc

we had some issues yesterday with the webserver. It should be fixed now. Could you please retry and let me know in case the problem still remains.

Best Adrian

xuliuouc commented 6 months ago

Hi @xuliuouc

we had some issues yesterday with the webserver. It should be fixed now. Could you please retry and let me know in case the problem still remains.

Best Adrian

Dear Adrian,

Thank you for your reply. I'm afraid that the problem remains, just like yesterday.

Best, Xu

sinamajidian commented 6 months ago

Could you please try for a few prokaryotic species? I just tried it, and it took a few seconds.

Screenshot 2024-01-24 at 14 12 59 Screenshot 2024-01-24 at 14 13 07 Screenshot 2024-01-24 at 14 13 13
xuliuouc commented 6 months ago

Could you please try for a few prokaryotic species? I just tried it, and it took a few seconds.

Screenshot 2024-01-24 at 14 12 59 Screenshot 2024-01-24 at 14 13 07 Screenshot 2024-01-24 at 14 13 13

Wow, it works. Thank you, and I think I know where the problem is. I only selected one species for testing, so it would not start downloading. That is a dumb question I asked. Thank you all for your patience. LOL

sinamajidian commented 6 months ago

No worries :) Please let us know if you have any other questions. I'm closing this issue for now.