DevoLearn / devolearn

Accelerate data driven research on embryos with deep learning models :microscope:
MIT License
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devolearn: long term vision #55

Open Mayukhdeb opened 3 years ago

Mayukhdeb commented 3 years ago

This issue would be a tracker/conversation space for devolearn's core long term goals.

Here are some of the key goals to work on:

The picture attached below is the layout of how we want to see it :arrow_down:

devolearn_vision

If you have any suggestions/ideas, feel free to discuss below :)

cc: @balicea @ujjwalll

devoworm commented 3 years ago

This looks pretty good. Is there a process for input data (pre-processing and sampling procedures for a given dataset)? It looks like there are pre- and post-processing steps in the Base Inference engine -- but this is for model training, correct? We need a separate process for data handling.

The multiple species/multiple models relationships look pretty good. I would think that over time, having multiple options here would be advantageous. Perhaps we eventually have a model chooser for users to select the best model for a given dataset (even within a single species, there is a lot of variation across development).

Mayukhdeb commented 3 years ago

The webapp/GUI can be built on top of a fastAPI/django backend + react.

In case we ever want to host it on heroku, we'd want to convert all of our models to onnx.