Dfam-consortium / RepeatModeler

De-Novo Repeat Discovery Tool
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NINJA segmentation fault #209

Closed rmhubley closed 1 year ago

rmhubley commented 1 year ago
          Hello,

I am facing the same issue. I compiled Ninja from the source and still I am having a segmentation fault issue.

NINJA-0.95-cluster_only/NINJA/Ninja --in mafft-alignment.fa --out cluster.dat --out_type c --corr_type m --cluster_cutoff 0.2 --cluster_cutoff 0.2
Reading...
Segmentation fault

Any ideas how to solve this issue? Best, André

Originally posted by @deoliveira86 in https://github.com/Dfam-consortium/RepeatModeler/issues/74#issuecomment-1438003678