Dfam-consortium / RepeatModeler

De-Novo Repeat Discovery Tool
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Cant run rmblastn #246

Open ali21049 opened 2 weeks ago

ali21049 commented 2 weeks ago

Hi I am have installed the precompiled version of rmblast When I try to run it I am getting following error

./rmblastn: /lib64/libm.so.6: version GLIBC_2.29' not found (required by ./rmblastn) ./rmblastn: /lib64/libc.so.6: versionGLIBC_2.18' not found (required by ./rmblastn) ./rmblastn: /lib64/libc.so.6: version `GLIBC_2.28' not found (required by ./rmblastn)

I am running it on HPC

rmhubley commented 2 weeks ago

The binary that we distribute is using a newer GLIBC than is installed on your systems. The easiest way forward is to compile rmblast from source on your system. That will build a binary that uses your current version of GLIBC. The instructions for downloading/compiling rmblast can be found here: http://www.repeatmasker.org/rmblast/