Create a Galaxy tool to create an open digital specimen object

DiSSCo / SDR

Specimen Data Refinery

Apache License 2.0

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Create a Galaxy tool to create an open digital specimen object #23

Closed llivermore closed 2 years ago

llivermore commented 3 years ago

The tool should be able to create an open digital specimen object based on the minimal data input for de novo digitisation. User input would be:

Image URI
Object type ~~Material type~~: [Pinned Insect, microscope slide, herbarium sheets]
Image license

Strong recommendation:

Higher taxon [rank TBC]

Part of #22

PaulBrack commented 3 years ago

@llivermore have looked at the example JSON - should we include institution name and unique identifier here?

wouteraddink commented 3 years ago

Please note that we seem to reach some consensus in MIDS (https://github.com/tdwg/mids/issues/5) that objectType should describe what kind of object is it , while materialType describes what is it composed of (organic material in these examples). So I would suggest to change Material type to Object type here.

llivermore commented 3 years ago

@PaulBrack I have started to compile a list of terms. All the terms labelled as submission are the ones marked "Submission".

PaulBrack commented 2 years ago

Tool created in Ruby - needs installing and testing on test server. In the medium term this needs rewriting in Python.