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DiamondLightSource / Savu

Tomography Reconstructon Pipeline
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res_norm=True fails on AstraReconGpu #859

Closed elainehoml closed 2 years ago

elainehoml commented 3 years ago

Hi,

When running iterative reconstruction with AstraReconGpu, the reconstruction fails when I set res_norm=True. Setting res_norm=False works fine.

The error log for this is found here: log.txt

Process list to replicate: mrc_AstraCGLS_GPU_resnormFalse.zip

Test data used was test_data/data/test_image.mrc

Versions:

Thank you :)

dkazanc commented 3 years ago

Hi, thanks for using Savu and I can confirm of the error. Will let you know when fixed. cheers

dkazanc commented 2 years ago

hi, the bug is now fixed in 2021.11 version. Please try if it works for you. cheers

elainehoml commented 2 years ago

Hi @dkazanc,

Thanks for fixing this! I can confirm that this works but in the process I have discovered another bug where the TiffSaver plugin doesn't work if res_norm=True (sorry :( ).

I've attached process lists here as well. process_lists.zip

The error that I get is 

Exception: ERROR: Broken plugin chain. 
 Please name the 1 in_data sets associated with the plugin TiffSaver in the process file.

Thank you :)