DiamondLightSource / SuRVoS

(Su)per (R)egion (Vo)lume (S)egmentaton workbench
Apache License 2.0
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Import of completed segmentations from other softwares #59

Open MicheleCD opened 5 years ago

MicheleCD commented 5 years ago

We've had a request to be able to import specifically .mod files from an IMOD segmentation.

My understanding (which may be flawed) of IMOD segmentations is that they are a series of model points that can then be "skinned" to display your segmentation in IMOD.

It would be good to either be able to read the output .mod file from IMOD into SuRVoS, or to be able to provide some guidance on how best to output the .mod file (or some other file) from IMOD that can then be read into SuRVoS.

Some potentially helpful resources: YouTube tutorial for how to segment in IMOD: https://www.youtube.com/watch?v=BsNSVLIQ-cE Written tutorial about segmenting in IMOD: https://bio3d.colorado.edu/imod/doc/3dmodguide.html#ViewingModel

Aha! Link: https://dls1.aha.io/features/D-21