DiamondLightSource / httomo

High-throughput tomography pipeline
https://diamondlightsource.github.io/httomo/
BSD 3-Clause "New" or "Revised" License
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Add flag to CLI to pass output directory instead of httomo creating it #305

Closed yousefmoazzam closed 1 month ago

yousefmoazzam commented 2 months ago

The launcher script needs to have the output directory that httomo results get put in. This in turn is due to the launcher script needing the filepath to the concise logfile so then a tail command can be displayed on the terminal for users to run to check the progress of the cluster job.

If the timestamped directory is created by httomo, the launcher script has no way of knowing what the created directory is, and thus cannot provide a filepath to the concise logfile when the job is successfully submitted.