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DigitalSlideArchive
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DSA-WSI-DeID
A workflow for redacting PHI from whole slide images (WSI) based on the Digital Slide Archive.
https://digitalslidearchive.github.io/DSA-WSI-DeID/
Apache License 2.0
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Handle updates to packages
#412
manthey
closed
4 days ago
0
Harden the subtree count when no user is logged in
#411
manthey
closed
2 months ago
0
Update the ruff command in tox
#410
manthey
closed
3 months ago
0
Harden S3 import processing by reducing a warning
#409
manthey
closed
4 months ago
0
The default thread pool concurrency is too much for ocr
#408
manthey
closed
4 months ago
0
Harden API call to database.
#407
manthey
closed
4 months ago
0
Update a vips constant
#406
manthey
closed
6 months ago
0
Harden a condition where you can have a blank title
#405
manthey
closed
6 months ago
0
Update .trivyignore
#404
manthey
closed
7 months ago
0
Add the ability to config from db as well as girder.conf
#403
manthey
closed
6 months ago
0
Allow many options to be configured via the web UI
#402
manthey
closed
6 months ago
0
added ability to configure the size of the macro square
#401
manthey
closed
7 months ago
1
Redaction failing on .ndpi images. Failed to redact item 'bytes' object has no attribute 'encode'
#400
Sravani-K
closed
6 months ago
17
added ability to configure the size of the macro square
#399
jcelano
closed
7 months ago
8
Import data if imported from an assetstore
#398
manthey
closed
7 months ago
0
Speed up import by ensuring an index on file paths
#397
manthey
closed
8 months ago
1
Add some folder API endpoints.
#396
manthey
closed
8 months ago
0
Check subregions of images for barcodes
#395
manthey
closed
8 months ago
0
Add a guard around an empty title.
#394
manthey
closed
8 months ago
0
Make it clearer to adjust API match methods.
#393
manthey
closed
10 months ago
0
Use barcodes
#392
manthey
closed
11 months ago
1
Additional tuning for OCR.
#391
manthey
closed
11 months ago
0
Move to ubuntu 22.04 and Python 3.11 in Docker
#390
manthey
closed
11 months ago
0
Harden path case number OCR processing.
#389
manthey
closed
11 months ago
0
Update trivyignore
#388
manthey
closed
11 months ago
0
Unpin torchvision.
#387
manthey
closed
11 months ago
0
Suggested fix for XSS issues
#386
gershkovich
closed
11 months ago
0
Unpin pillow. This had been pinned because of easyocr
#385
manthey
closed
12 months ago
0
Slightly reduce docker image size.
#384
manthey
closed
1 year ago
0
When provisioning, update mongo compatibility version
#383
manthey
closed
1 year ago
0
Update to handle mongo 7
#382
manthey
closed
1 year ago
0
Add the ometiff and dicom sources to the deployment.
#381
manthey
closed
1 year ago
0
Update node version in Dockerfile.
#380
manthey
closed
1 year ago
0
Reduce trivyignore to the minimum necessary
#379
manthey
closed
1 year ago
0
Update trivyignore
#378
manthey
closed
1 year ago
0
Update .trivyignore
#377
manthey
closed
1 year ago
0
Handle PIL changing textsize
#376
manthey
closed
1 year ago
0
Allow all users to do bulk refiling.
#375
manthey
closed
1 year ago
0
Add some frontend tests for lookup workflow
#374
naglepuff
closed
1 year ago
3
Update the docs based on feedback
#373
manthey
closed
1 year ago
0
API Search Basic Tests
#372
naglepuff
closed
1 year ago
3
Guard against slow subtree counts.
#371
manthey
closed
1 year ago
0
Add simple docs for configuring the SEEM*DMS database.
#370
manthey
closed
1 year ago
0
Add a system endpoint to report the complete config and settings
#369
manthey
closed
1 year ago
0
Update some documentation on debugging.
#368
manthey
closed
1 year ago
0
Preserve checked items on re-render
#367
naglepuff
closed
1 year ago
0
Hide upload button when in a SEER project folder
#366
naglepuff
closed
1 year ago
0
Retry tests a limited number of times on CI
#365
manthey
closed
1 year ago
0
Store custom metadata in the barcode field for isyntax
#364
manthey
closed
1 year ago
0
Improve docs on OSX and in girder sample conf files.
#363
manthey
closed
1 year ago
1
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